- Probe CUST_15459_PI390587928
- Source Contig U35_50878
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_15459_PI390587928 | Hv_44K_v2 | CGTGTGCAACTCACCTGTTTCAAACGTGATGATATTCATCGTTGCTTGGAAACTAAAAAA | 9 | GeneList: grey60 MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 4.739 | 3.552 | 1.259 | 0.662 | 0.193 | 0.248 |
| Raw | 170.541 | 205.704 | 61.391 | 51.900 | 3.484 | 7.177 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_50878 | 158 | 3e-25 | 10 - 69 | 100 | 60 / 60 | minus |
Contig Sequence (158 bp)
>U35_50878 158 Hv_44K_v2 TTTTTTTTTTTTTTTAGTTTCCAAGCAACGATGAATATCATCACGTTTGAAACAGGTGAG TTGCACACGTGAAATGAAGAAATCCAAAAATTTGCTACTGCTTCATATATAAGAAATACA GCGCCTCAACATGTGGCTTGCTAACACATGCCTCGTGC
Homology of Contig U35_50878 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |