barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15437_PI390587928Hv_44K_v2TGAATTCTCCCAACTGCAATTTTTCTGATAGACCGGGAGCTATGTCTTCGCGAAACATGA476GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_63371.231342e-242153 - 221210060 / 60plus ABC19745
MLOCMLOC_63371.330992e-24835 - 89410060 / 60minus ABC19745
MLOCMLOC_63371.124462e-24926 - 98510060 / 60minus ABC19745
MLOCMLOC_63371.431022e-24835 - 89410060 / 60minus ABC19745
JLOC1JLOC1_41498.730478e-252068 - 212710060 / 60plus
JLOC1JLOC1_41498.627218e-251742 - 180110060 / 60plus
JLOC1JLOC1_41498.527788e-251799 - 185810060 / 60plus
JLOC1JLOC1_41498.428948e-251915 - 197410060 / 60plus
JLOC1JLOC1_41498.327578e-251778 - 183710060 / 60plus
JLOC1JLOC1_41498.223138e-251334 - 139310060 / 60plus
JLOC1JLOC1_41498.122378e-251258 - 131710060 / 60plus
Harvest21ABC317126243e-25477 - 53610060 / 60plus
Harvest35U35_365956243e-25477 - 53610060 / 60plus



Contig Sequence (624 bp)

>U35_36595 624 Hv_44K_v2
CTCTGGCCATTTTGATTGCCCTGTTTGCTATTGCCGTAAAGCCGCTGAAGCATTGGAAAA
GGCTAAGAAAACATATTCTGAAGCTAGGAAAAATTTATCTGTTTTCTGCAGCGGCTGGAA
GCAATTTACAAAGGAATTCAGTGAGCAATCTATTGGAACTCAGCAAAGAGCTGCTAACTT
CGAGGATCAGATGAATGGCTTTAACACAGCTAAAAAGCAAGGTAACCATCAGTCTGAAGC
AGCTAAGCTGTCTTGCAAGGATGAAGAGCCTAATCATCTTAAAGAAAATGGTACAAGTGA
TGCTTGTCCTGATAAGGTAGTCACCACAAAGACAACCGTTTCTCCGAGTTCTGAAAATGC
AAAATCCCATGGAGATGGCAATAGCAATTCGTCTCGTCAAGTGCCATATTCAGCTCGGGA
TAAATTCAGTTCTGTTGCAAATCACAACATCGGGGTTGGCAAAGAGAATTGTCTTATGAA
TTCTCCCAACTGCAATTTTTCTGATAGACCGGGAGCTATGTCTTCGCGAAACATGAGTCG
CCGCANAGTAAGCTTTCAAGAAATGGNGACAGTGGCACCAAATAGTACTTGGAAAACATT
GAGGTACCANGATCAGTTCGTGCA



Homology of Contig U35_36595 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None