barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15425_PI390587928Hv_44K_v2ACTGTTTTTTCCAACAATGTAAGCGGCTGGCTTGTAAGCACTGTTTTTTCCAACAAAAAA8GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5101.4171.3570.9230.4190.584
Raw 73.734102.25591.34392.03515.53824.192



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_508927983e-259 - 6810060 / 60minus



Contig Sequence (798 bp)

>U35_50892 798 Hv_44K_v2
TTTTTTTTTTTTTTGTTGGAAAAAACAGTGCTTACAAGCCAGCCGCTTACATTGTTGGAA
AAAACAGTGCTTACAAGCCACTTACGCACGCTTAGGTGCTAAGTAATGGCTGAACGCCTC
GCCTTGAGTGAAAGTCTAGGCAGGGCAAATAAGAAATTGCCTACACGATCAAGCATGACA
TATTGCATTGATATGTCAAATGGTAGTAGATGATAGTTCACTTAATTATATGCCCTAAAT
TAATATCAATACACACAGAATAACCATACATACACTCTGATAATAAAAACTGTCGCAAAG
GCCAACAGCCTGCTTGGCTTGCGTTTTTTCCAACCTTGGGCACATATGTAGATACTGGAT
GTCATGAAGCTGGAAGAACCATCCATTTCTTACATATGACTGTCATATCCTGCTAGTGGG
CCTGCCAGATTCACTCCATGAACCTGCATTTATATCATCATGCAAATGAAATCAGACAAA
AGATGGGCGCAAGAGATAAAGTAAAGCATCCTTTGTGCCATCATAACAAGGGCTTCTTGT
AATGCCTGATGCAAGATAACTCCCGTAAGCATATAATTTAATTTATAGAGCTGCGTGGGT
ACATTAAGATTCAACTTACTACCAGATCTCCCCACATAAAAGGGAACCAATTTATTAAAA
TCACATGGCAAATCTTAAATGAGCCCATGTGGAAGACGCAGACATTTCTTGCAAGGCAAG
GGATTGTAGTCCAATGAGAGCACTATGATTGCAGAGATACTTTACAACATGAAGGTAGAT
TAAAGATTGAATGAAACG



Homology of Contig U35_50892 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None