- Probe CUST_153_PI390587928
- Source Contig U35_45862
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_153_PI390587928 | Hv_44K_v2 | CATCATCCGCCCCAAGGCCGGCAAGTACCCGTTACCGACGCCCGCCAAGGACGTGCCCAT | 153 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK369820 | 2032 | 7e-23 | 505 - 564 | 98 | 59 / 60 | plus | ABC26545 ABC39897 |
| MLOC | MLOC_61948.1 | 2054 | 7e-23 | 497 - 556 | 98 | 59 / 60 | plus | ABC26545 ABC39897 ABC40171 |
| MLOC | MLOC_61948.2 | 2052 | 7e-23 | 494 - 553 | 98 | 59 / 60 | plus | ABC26545 ABC39897 ABC40171 |
| JLOC1 | JLOC1_40514.1 | 2047 | 4e-23 | 490 - 549 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC45225 | 213 | 3e-25 | 154 - 213 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_45862 | 213 | 3e-25 | 154 - 213 | 100 | 60 / 60 | plus |
Contig Sequence (213 bp)
>U35_45862 213 Hv_44K_v2 GAGCTGCTGGTCCGATGGCGCCGGCTTCGTCACCGAATGCCCCATCCCTCCCGGCGGCGA GCACGTCTACCGCTTCAACGGCACCGGCCAGGTCGGCACGCTGTGGTGGCACGCCCACGT CACCTGCCTCCGCGCCACCGTTGCCGGCGCCTTCATCATCCGCCCCAAGGCCGGCAAGTA CCCGTTACCGACGCCCGCCAAGGACGTGCCCAT
Homology of Contig U35_45862 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |