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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15371_PI390587928Hv_44K_v2AGAAGACGAGCCACCTCGCGAGGACCCCCGCAAGAAGAAGAAGCAACTCCTCCACACGGA335GeneList: brown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 4.3054.4940.7180.5081.0120.846
Raw 33.63147.9206.4565.3124.5093.941



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC334675683e-25336 - 39510060 / 60plus
Harvest35U35_377735683e-25336 - 39510060 / 60plus



Contig Sequence (568 bp)

>U35_37773 568 Hv_44K_v2
TACGAACAGCTCATGCCGACCAAGCCCTTCTCAGGAGTCATGGAAGGGTCCACCGTGCCC
ATCGGGCAGGTGCGTCTGCCAGTCACATTCGGTGAGTGCAAGAACTACCACACTAAGATC
ATCGTCTTTGATGTCGCGCACATCCATCTGTCGTACAACGCGATCCTTGGGTACCCGGCT
CTCGCAAAGTTCATGGAAGTGACCCACCATGGCTGCAACGTCCTCAAGATGCCAGGGAGC
GGTGGTATCATCACGATCACCTGCGACGAGAAGGATGCCATCTGTACACTCGAGCGTGCC
TACCGCGCCACATCGGCAGAACGTTCGAACGACGAAGAAGACGAGCCACCTCGCGAGGAC
CCCCGCAAGAAGAAGAAGCAACTCCTCCACACGGAGCACCCTGGGACTTCGGGCTCCGTG
CCCAGGGACGGGGTCATGCCTATCATCGCACAGGAAGTCGCGCTCGGTGCCATCCTTGGG
TCAGCCCTGGGGGCTCCCATCGAGGAGGTTCCCGGCATGACCAGTGAGGCGAGGGTGGCG
CTCAAGCACAACCCAAGGGTGCACTCCG



Homology of Contig U35_37773 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None