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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_1492_PI390587928Hv_44K_v2TTGCAATGTTTGAATCTCCCTTTGGGACTCGTATCATGTGTTTAGATGTATCACTTCAGG580GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_9793.340452e-241646 - 170510060 / 60plus ABC25200
MLOCMLOC_9793.243442e-241574 - 163310060 / 60plus ABC25200
MLOCMLOC_9793.143092e-241591 - 165010060 / 60plus ABC25200
JLOC1JLOC1_6353.442958e-251526 - 158510060 / 60plus
JLOC1JLOC1_6353.343258e-251556 - 161510060 / 60plus
JLOC1JLOC1_6353.243438e-251574 - 163310060 / 60plus
JLOC1JLOC1_6353.143398e-251570 - 162910060 / 60plus
Harvest21ABC377866403e-25581 - 64010060 / 60plus
Harvest35U35_422426403e-25581 - 64010060 / 60plus



Contig Sequence (640 bp)

>U35_42242 640 Hv_44K_v2
GTCTCTTTNTATGACACATTGGAAGAAAAAGCGGCCCCATATGGTCTGAAATACGAGTCT
GAGGTGTTTGAAGTATCTTCTCCTATAGTATCAGGACGGCATGGTGCCTTGGATAGCAAA
AGTGAATATGTCCGATGCTTACACTTTGTGCAACAAAATATTCTCTATGTTGCCACAAAC
AATGGATATCTGCATCATGCTGACCTCTCTAATACAAAAGATGTAAGATGGACTGAGGTT
ATTCAGGTCACAGAGAAAGCACCGATCATATGTATGGATGTAATGATAGTGTCCTCAGAC
TTTTCTCTGGATAAGGAGGATATAATTGCCCTTGGAGACGGCCGTGGGAATGTTACTATT
GTCCGGTTAAGCAGTCCCAGTCTTGAACCTAAAATAGATTTATCTTTTACCTGGCCAGCT
GAAAAGGATAGGCAACTACTAGGATTATACTGGTGCAAGTCACTTCAATGTAGCCACATT
TTCACAGCTGATCCTAGAGGCACTCTTAAGTTATGGAATGTAAGGAATGCCCTTTTGTCA
AATGGCCATGCGATTAGTACAGCTCAGGAGGTTTCACTTGTTGCAATGTTTGAATCTCCC
TTTGGGACTCGTATCATGTGTTTAGATGTATCACTTCAGG



Homology of Contig U35_42242 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g02110.213163e-94protein|WD domain, G-beta repeat domain containing protein, expressed
Brachypodium v1_2Bradi1g77780.113433e-106
Arabidopsis v10None