barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_14890_PI390587928Hv_44K_v2ATTGTCAATAAATCAAGGGAGGGCGTCAATCCTGCCCATCGAAGGAAATTATTCTCGAGG256GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_6442.121763e-211092 - 11519758 / 60minus None
MLOCMLOC_6442.421883e-211068 - 11279758 / 60minus None
MLOCMLOC_6442.225013e-211102 - 11619758 / 60minus None
MLOCMLOC_6442.322973e-211101 - 11609758 / 60minus None
MLOCMLOC_6441.343783e-211879 - 19389758 / 60minus ABC13589
MLOCMLOC_6441.143433e-211892 - 19519758 / 60minus ABC13589
MLOCMLOC_6441.243953e-211891 - 19509758 / 60minus ABC13589
JLOC1JLOC1_4206.621002e-21944 - 10039758 / 60plus
JLOC1JLOC1_4206.516872e-21551 - 6109758 / 60plus
JLOC1JLOC1_4206.416832e-21527 - 5869758 / 60plus
JLOC1JLOC1_4206.316532e-21517 - 5769758 / 60plus
JLOC1JLOC1_4206.219032e-21517 - 5769758 / 60plus
JLOC1JLOC1_4206.116572e-21517 - 5769758 / 60plus
Harvest21ABC326813253e-25257 - 31610060 / 60plus
Harvest35U35_370703253e-25257 - 31610060 / 60plus



Contig Sequence (325 bp)

>U35_37070 325 Hv_44K_v2
GCCAAGGACTTAAAGCTGTGAATAAGATAGGTGCATCAAGTGAACCTGGGGAACATGTTT
CTTTTGTTACAGTATTCACAACATACAGTTCTGACCCAGCTGGGGCTGGCAAACGGTCAT
CCGATGCTCTAACTGTTGGAAAGCATTCTTATGGCAAGGAGGAGAGGTCCATGGCCATTC
TTAACACTTTCATCAGCTTCATACAGGTGTCAATGCCAAGAAGCGATGTGATAATATTGA
CTGATCCTAAATCAAAATTGTCAATAAATCAAGGGAGGGCGTCAATCCTGCCCATCGAAG
GAAATTATTCTCGAGGCAACCTGAT



Homology of Contig U35_37070 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None