- Probe CUST_14885_PI390587928
- Source Contig U35_37077
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_14885_PI390587928 | Hv_44K_v2 | TAGTATCTCATGCATGTCCACCGTGAGTTCGTTCGTTCGTTAGTTTGACAATTCATGGCG | 213 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | AK357407 | 2459 | 2e-24 | 2382 - 2441 | 100 | 60 / 60 | plus | ABC23511 ABC32690 |
MLOC | AK362642 | 3081 | 2e-24 | 2332 - 2391 | 100 | 60 / 60 | plus | ABC23511 ABC32690 |
MLOC | MLOC_20947.1 | 1333 | 3e-21 | 873 - 932 | 97 | 58 / 60 | plus | ABC23511 ABC32690 |
JLOC1 | JLOC1_14526.1 | 1101 | 2e-21 | 871 - 930 | 97 | 58 / 60 | plus | |
Harvest21 | ABC32690 | 316 | 3e-25 | 214 - 273 | 100 | 60 / 60 | plus | ABC32690 |
Harvest35 | U35_37077 | 316 | 3e-25 | 214 - 273 | 100 | 60 / 60 | plus |
Contig Sequence (316 bp)
>U35_37077 316 Hv_44K_v2 GGGAAAACGGAGAGGAAATTCGGAGGACGCGACGTGATATTCAAAACAAAATTCCAAGAG CTCGATTTGGTGAAACCCCGGTGCTGCCCCGTCTGCGCCGGCACTAGTGTACAGTCTGAG AGGTCGTTTTCCATTGGAAAACCCCCAAAAAAAGAGAGAGAGGAACAAGGGTAGCAGTAC TAGCAGTAAAGTTTTGGTTTCGTCTTTGACTGGTAGTATCTCATGCATGTCCACCGTGAG TTCGTTCGTTCGTTAGTTTGACAATTCATGGCGCGGGCGCCATGTCCTTCCCCTTCTTCA AAAAAAAAAAAAAAAA
Homology of Contig U35_37077 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |