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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_14604_PI390587928Hv_44K_v2AATTATCAGCCATACTGGCATAGTCCTGGCTTGTTTGGATGATTGGTGCATGGCTTCTTT724GeneList: brown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 4.6475.3171.7770.4690.1640.181
Raw 1183.7392063.629587.615244.69630.09036.345



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_225588183e-25725 - 78410060 / 60plus



Contig Sequence (818 bp)

>U35_22558 818 Hv_44K_v2
CGGCACGAGGGCCGCCGCCGCCGCTGCTTCAGTCGAGGGGATTAGGGTGCTCGCCGATGA
CCCCATCCACCTGCAGACCATGACACAGACACAAGTGTTCGCTGGCGACCAGACCATGGG
GATGGCGAGGAGGGGGGTCAATGGAGGCGCGTGTGGCTTCCTGACCAAGCCCCTGGGCGA
CGACAGGATGCACAACATAGTCAAGGAGCGAAGCCTCAACACCGCCGCCCCGGCGAACCA
CGATCCTCGCTGCATCCATGTCGTCCGTCAGGATGGCATGTCGAGGAAGAGGCCAGTGGA
AGTGGACCACTCAGACAACGGGGGCTCCGATGGCAGGACCTCCAAGAAGATCAACTTCCA
GTGGGCTACACAGAAGCATCCGTTACTTCTGAAAACGGCCAACAACCAGCTCAGTGGAAC
GGAAGGTGCGTGAAATTTATTGAAATATATGATTCGTAATATCTCCATGTTTGGCACTTT
GTGCCAGCTGCGATCATACACAATCGTTGCTACCTGTTTTATTTCTTGGTACTCATTTAC
TAGCCGGTAACCAATGTGTAAGCATGCATGCATGCATATGCAAGTTTGTGATTTTGATGT
AGGAGATAGTGAGTACCATATATATGTGCATGTGGGAGGCCAAAAGCATGGACTTGCATG
TTTTATTCTCGGGCCAAAATGGTCTTGGCATCTACTGGTATAGCCTAGAGTGTATGAAGT
ACTTAATTATCAGCCATACTGGCATAGTCCTGGCTTGTTTGGATGATTGGTGCATGGCTT
CTTTGGAAGTTTGTGATTTTAAAAAAAAAAAAAAAAAA



Homology of Contig U35_22558 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None