barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_14552_PI390587928Hv_44K_v2GGCACTATAAAACCAAAAAACCGAACGGAACCTATCCGTATTAACTGATTTTTGGTTTAA956GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.8201.6971.1700.7930.9220.819
Raw 13.97818.90312.57112.1804.0264.035



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_879110313e-25957 - 101610060 / 60plus



Contig Sequence (1031 bp)

>U35_8791 1031 Hv_44K_v2
CTTCTCCCAACCCAACTCGTTACAATCTATCTTCTTTTGCGATCACATTGAATGAGCTGA
CCCCAGAGCTTCAGGTATTCGTGTGGTTGTAATCTATGTGCATAAATACTCCATAATCCA
TAATATTCTGTCAAGACCTAAATTTTGCAATTGTTTGACCATGGTAAAGGAGAAACTCCC
CCCTACCGATTCACGTCTGAGACCAGACCAGCGGCATTTAGAGAATGGCGAATATGAGAA
GGCAAATACAGAGAAGTTGAGGTTGGAACGGCGGCAAAGAATGTCGACTAAACTTCAAGA
CAATGGTTGGAAGGCTCGATGGTTCGAGCAGGACGCTGAAGACGGGACATATCATTACAA
AGGTGGGTACTGGGAAGCAAGGGACCAAGGACGTTGGGATGGATGCCTCGACATATTCGG
GGAGTTTTCAGAAATGTGAACGACCGGCGTTGCAGCAACACTTGGTTCATCCACCCCAAC
TGCAACGCGATGATCCTCGTTGGAGCAGCATTGTGCCCGAAAGCATCATCGGGTTCAGGA
AGAAGAGGAGAGAGGAATGCAATGCAGTGGATATAGAGGCATTGAAGAAGAAGGCCTTGC
CGTCTTGAATGGTAGATAGACATGGATGGCGATGGTCTCCGGCCCTTTATTAGTAGTACC
TAAATAATAATGCAGCCATTCTTTCGTTCGTTTGTGTTGGATGCTTGTTGTTCATTAGTC
TTTTCCATGTGGGATTGGCTGGTGAAGCAACTCTTATCTGGATGTTCCGTAGATCGTAGC
GTCATTTGTAGAAAGAAATAGAGGATAAGTTTACAAAAAAATACCATAGAGTGGATAGAT
AATGGCATAAGCTCGGCAAAGAAAATCTCATTCGTTGCTTTGCTGAAATGTTTTTTACAT
ACTTTGCTGAAATGTTTTTACATACTTTGTTCATATACTACTCCTTCCTAGGGGTAGGCA
CTATAAAACCAAAAAACCGAACGGAACCTATCCGTATTAACTGATTTTTGGTTTAAAAAA
AAAAAAAAAAA



Homology of Contig U35_8791 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os08g05870.15313e-51protein|oxysterol-binding protein-related protein 6, putative, expressed
Brachypodium v1_2None
Arabidopsis v10None