- Probe CUST_14222_PI390587928
- Source Contig U35_36124
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_14222_PI390587928 | Hv_44K_v2 | CTGTTCCACAACAGCATGCATTGTTTCCTTTGAAATTTTGGTTTATACATCGTTGGTATG | 46 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_76955.4 | 2091 | 3e-21 | 910 - 963 | 100 | 54 / 54 | plus | ABC40023 |
| MLOC | MLOC_76956.1 | 1834 | 3e-21 | 655 - 708 | 100 | 54 / 54 | plus | None |
| MLOC | MLOC_76955.7 | 2253 | 3e-21 | 1072 - 1125 | 100 | 54 / 54 | plus | ABC40023 |
| MLOC | MLOC_76955.1 | 2338 | 3e-21 | 1149 - 1202 | 100 | 54 / 54 | plus | ABC40023 |
| JLOC1 | JLOC1_51321.7 | 2020 | 2e-21 | 831 - 884 | 100 | 54 / 54 | plus | |
| JLOC1 | JLOC1_51321.6 | 2198 | 2e-21 | 1009 - 1062 | 100 | 54 / 54 | plus | |
| JLOC1 | JLOC1_51321.5 | 3222 | 2e-21 | 2033 - 2086 | 100 | 54 / 54 | plus | |
| JLOC1 | JLOC1_51321.4 | 2036 | 2e-21 | 847 - 900 | 100 | 54 / 54 | plus | |
| JLOC1 | JLOC1_51321.3 | 2219 | 2e-21 | 1030 - 1083 | 100 | 54 / 54 | plus | |
| JLOC1 | JLOC1_51321.2 | 3235 | 2e-21 | 2046 - 2099 | 100 | 54 / 54 | plus | |
| JLOC1 | JLOC1_51321.1 | 2041 | 2e-21 | 852 - 905 | 100 | 54 / 54 | plus | |
| Harvest35 | U35_36124 | 794 | 3e-25 | 47 - 106 | 100 | 60 / 60 | minus |
Contig Sequence (794 bp)
>U35_36124 794 Hv_44K_v2 TATAGGGCGAATTGGGCCCTCCTCAAGATGCTCGAGCGGCCGCTCACATACCAACGATGT ATAAACCAAAATTTCAAAGGAAACAATGCATGCTGTTGTGGAACAGAGGGGGTACCTCAA ACCTCATACAGATACCTAATAATAGTTTAGGTACAAATTTGTGAACAACACTACCTGCGA GATGCACAAAGAAATAGGGTTGAATTTATGATAGAGATGGTCACACCACATACACGAGAG CGGCATATTTGCAACCAATAAGATGAGAATCTTCCACCCCTTTTCACAAATTAAAAAAGA TATAGCCATGTCTGCATAGCTGGTACAGGAGGGACTTCAAATTATAGCGCAGCATCTGTG GAGAACATTAAGTCTTGAGCAGCGGCCGCTCATATCATTCATGTTCTGTATGCTAGTCAC AGCACCATACGGGCCTTGTGTATCTTCCATCCGTAGTGATTTCATCGTATTCGAACCGCT AGTCTTATATCACATATTCATACCACAGTCATTTCACATGACAACTTGCCAAAAGGTATT ATTTGGCACAGGGCTTGACACTATGCTCTCATCCCGGTTCTACCACTTCGCTGCGCTCCA GAGACCTTTGGAAGTTTCGATAACTCGATTTCCGTTGTTGCCGGGTTGCAACGAGGATGG GACGTTGGATGCTGAAGTGTTGCCCATAACCACGTCATTTTCGGTTTGTGTTCCATAGCC GCTGTCCTTGGGCTGATTGTTGCCAATAGAGATGGCGCTGTCTACCTTTCGGTTGGTAGG GGTCTGTTGGGCTG
Homology of Contig U35_36124 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |