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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_14064_PI390587928Hv_44K_v2TGTTTCGATGATTCTCAATGGAAGATCGGGGCGTTTTTGACCAATTCTTTTGCAAATAAA553GeneList: lightsteelblue1
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 3.3561.7971.1120.7620.3660.341
Raw 30848.60022349.30014366.33314388.5472646.6632635.647



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_222.118828e-251229 - 128810060 / 60minus
Harvest21ABC235216673e-25554 - 61310060 / 60plus
Harvest35U35_86457023e-25554 - 61310060 / 60plus



Contig Sequence (702 bp)

>U35_8645 702 Hv_44K_v2
GGTTACAATAGTGCCAGTTCTTGTATGGAAGGCCGTAATTCCGGTAACCTCGACTGCTCT
AAGAATGATCCGGGCTAGCCGGGCACATCACATCAAAGTTAGGTCATTTGTCAAAAACAT
GGCAAATAGCTCAGTTGGTTTGGTAAGGGAGCTATTCTCTCACTTAAACCACTCCCATAT
TAGGTATCCTATCTCGTCTTAAAGTTCCCCCGCATTACCCATAACTTACCACCTGTATCT
CCGGAACTCAAATCGCAAAATGACAATGCTTTCGATAGTCTGTACTAAATTACTTTGTAC
GAATGCACATCTCGGCCGTCGGGTAGCTGATCACCATTTCAAAGTCTATATCCGTGGTTC
AAGAAATGGAATTGCTATTCTCGATTCAGACAAGACACTGATTTGTTTACGAAACGCTCT
TCATTTTATAGGATCTCTCATTCGTCAAAAAGGCCGTTTCTTCTTTTTAAAGACCAATCA
TTTATTTATTTATGAGATAACGGAAGAAATGGTGAGCTATTTAAGAAGCTATTTAAGAAA
TGTGAATTCTCATTGTTTCGATGATTCTCAATGGAAGATCGGGGCGTTTTTGACCAATTC
TTTTGCAAATAAAAAAAAATTCCGTTCAAGAAAGAAGAAGATCAATTTTGGGTTGAACCA
ACAACCTGATTGTGTGGTTATTCTGAAAAAAAAAAAAAAAAA



Homology of Contig U35_8645 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None