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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_14039_PI390587928Hv_44K_v2ACAAGCACAAACTTCGTTCGTGACAAGAAGAAGAAGAAGAAGCATGAGCAATGGCAGCTC124GeneList: brown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 13.94617.2651.5630.2740.4240.438
Raw 664.9691154.91893.09421.07214.02716.181



Probe Sequence's BLAST hits in Barley Unigene Datasets

This probe has no hits to the blast databases


DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence



Contig Sequence (581 bp)

>U35_8671 581 Hv_44K_v2
TCGAGCACTGTTGGCCTAAGCCTCGCTAGCTACATAGCTCGGCCATCTCATCGACCAGAA
AGCCTAATAGTTATACCTGCCCATCCATTTCTCTTCCTCATCTCAAAACATCATCATCCT
AGGCACAAGCACAAACTTCGTTCGTGACAAGAAGAAGAAGAAGAAGCATGAGCAATGGCA
GCTCCCCCACATCTTCCTCCCCTTCGGTCTGCTCGAGGTCATGGTCCATAAGTGAGGATT
CTTTGAGGAGGTACGTGAGCTACGCTAGCGAGAGCTGCATCCAGGAGCTGCTCGCGGCGT
CGGACTCGGGCGGCGCCGGACGCGGCGGGGGAGAAGGCGGCGACGAGGAGGACGGCGGGT
GGCAGACGCTGGCGTACTGCAACGGCGTGGAGATAGCGAAGCGGCGGTCGGGGACGGGGC
AGATGTTCCGGAGCCGGTGGCTGCTCTACGCCGTCTCGCCGGAGCAGTTCATGGCCGTCG
CCACGCCGTCGACGCAGCAAGCAGTGGGAGTCTGACCTGGTTGACGCGACGTACATCAAG
GAGCTGGGCGAGGACCTGAGCATCATCCACCTCAAGTTCGG



Homology of Contig U35_8671 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None