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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_13848_PI390587928Hv_44K_v2AGGCTGTTGATTCATCAGTGTAATAAAATAAGATCCGCTGTGTGTTGCGTCTCGAAAAAA1790GeneList: purple
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.5080.5690.9361.5221.0471.361
Raw 148.020252.690379.612938.964232.498327.624



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_62937.241039e-22338 - 39210055 / 55minus ABC12552 ABC47717
MLOCMLOC_62937.346979e-22338 - 39210055 / 55minus ABC12552 ABC47717
MLOCMLOC_62937.138019e-22338 - 39210055 / 55minus ABC12552 ABC47717
JLOC1JLOC1_41215.926175e-222429 - 248310055 / 55plus
JLOC1JLOC1_41215.827335e-222545 - 259910055 / 55plus
JLOC1JLOC1_41215.721745e-221986 - 204010055 / 55plus
JLOC1JLOC1_41215.621795e-221991 - 204510055 / 55plus
JLOC1JLOC1_41215.515165e-221328 - 138210055 / 55plus
JLOC1JLOC1_41215.414065e-221218 - 127210055 / 55plus
JLOC1JLOC1_41215.314115e-221223 - 127710055 / 55plus
JLOC1JLOC1_41215.214785e-221290 - 134410055 / 55plus
JLOC1JLOC1_41215.113515e-221163 - 121710055 / 55plus
Harvest21ABC477175233e-2512 - 7110060 / 60minusABC47717
Harvest35U35_1992418613e-251791 - 185010060 / 60plus



Contig Sequence (1861 bp)

>U35_19924 1861 Hv_44K_v2
TTAGCGGGCAACATCGCTTCTCGAATGTTGCGATGTCGACGACGGCGCATCATCCTGCGA
TCTGATCCCATCACCGGAGAAAAGAAGACCACGGGGAAAAGGTGAAGGAAGGACTGCCGG
TGAGCCGGTCCGCGGAGTGAAGTGGTGATCCACCTCCACCACCCACCCCAGGCCCCAACC
CACAAACAAACAGAAGCAGAAAGCCAGCCAGAAGCAACCCACCAGGCGGTTGAGCTCCCG
CGCCGCATCAGCACCCACGTCTTTAGCAGAGTAGTAGATGCAAGTTCTACTTCTGGCCGA
TTTTCTCTGATTCGGCGAGCCTCGGCGCCCGCGGCCAAGTCGAATCCAAGTCGGAATGGC
GACGGGGGAGGGCGGGGAGAAGAAGAAGGGGAGGAGGAGGTGGCTGCCGGCGGCGTGCCT
CCCGCGGCCCGGTTGCTTCACGGTGTCCGCAGCCGACGAGGGGCCCTCGGGCTCCGGCGC
CGACGACGAGGGGGGCGGGGGCGGCAGTCGGGCGCCGACGCATCTGATCGTGACGGTCAA
TGGGATCGTCGGCAGTGCAGACAATTGGGGTTACGCAGCAAAACATTTCATCAGAAAACA
CCCTGAGGATGTGGTTGTTCACTGCAGTGGATGCAACTCAGCAACTCGAACTTTTGATGG
TGTTGATGTGATGGGAAGGAGATTAGCGGAGGAGGTGATTTCAGTTGTTCAGTGTAGACC
AGAACTTAAGAAGATCTCCTTTGTTGCACACTCATTGGGTGGGTTGATTGCAAGATACGC
CATTGCACTACTATATGAACCTGCTACACAAACTGATAGTCATGAGGAGTATGAGAAGGA
TGTCAATGATGCTCCTAGCAAGCAACCGATGGGTCAAGGCAAGGTTGCTGGTTTGGAGCC
CATGAACTTTATAACTTTTGCAACACCACACCTTGGCACAAGATCACATAAACAGATGCC
CCTTCTCCGTGGTTCCTATAGATTGGAAAAGATGGCTTTTGGTATGTCTTGGCTTGCTGG
GAGAAGTGGAAAACATCTTTTTATAAAGGATGTTGAAGATGAGAAGCCACCATTACTTCT
TCAGATGGTTACTGATTACGGAGATCTCCATTTCATATCAGCTCTTCGTTCTTTCAAGCG
CTGTGTTGCTTACTCAAATGTTTGTGGAGACTTCGTTGTTGGCTGGAAGACATCTTCAAT
ACGCCGTCAACATGAACTTCCCAAGAAAGAAGATTTTGTGGATGATGTTAGATATCCACA
TGTTGTATATGTGGAAAAACCAAAAGCTCGGGATGTTGATTTTTCGGATGAAATGATTTA
TCAGGCAAAAACAACAAGTGAAATGGAAGAGGTAATGCTCAAAAGCCTGAATAGAATTCC
TTGGGAAAGGGTAGATGTTAGCTTCAAGAGGAGCAGACAAAGGATTTTTGCCCATAGCAC
CATTCAGGTAAAGACTTATTTCTTCAACTCTGATGGGGCCGATGTGATCTTCCACATGAT
CGACCATTTTCTTTACTAACATGGAGCGATATCGTGGCGGTCCCAGTTTCTTTCTCTTCT
ATTCTTCGTATTTGGATACCAATTTCAATTGGATAGGAAAAGGATAGTGCAAAAAGTTAT
TGGAGATACTACACTGGAACAGGTAGATCCACCCATGGTAAAAGGAGTGCTGGGCCTGTG
TATGTTTCCTGTAAAGTCTGTCTAGGGCTCGTAGGTTCCTTTTCAGTTTTTCTCTCTTGC
ATCGATGCTTCAGTGTGCATGCATGTAAATGTTTAATGGACCACAGCCACAGGCTGTTGA
TTCATCAGTGTAATAAAATAAGATCCGCTGTGTGTTGCGTCTCGAAAAAAAAAAAAAAAA
A



Homology of Contig U35_19924 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g51670.13860.0protein|serine esterase family protein, putative, expressed
Brachypodium v1_2Bradi1g10070.13820.0
Arabidopsis v10AT4G25770.14185e-116alpha/beta-Hydrolases superfamily protein | chr4:13117821-13119982 REVERSE LENGTH=418