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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_13799_PI390587928Hv_44K_v2AATAAATGTTGCATGAGTCGATTTGTGGTTGTGGTGCATGCATCCGTGGTATCTCCCTCT488GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0100.0100.5021.4612.1813.128
Raw 278.187622.51260684.533236477.000137122.000218284.333



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC025447153e-25512 - 57110060 / 60plusABC02544
Harvest35U35_8506923e-25489 - 54810060 / 60plus



Contig Sequence (692 bp)

>U35_850 692 Hv_44K_v2
GGATATTGCAAAGCTCAACATGGCGTCTAGCCAACTCGTGCCCTGGGCCTTGTTGCTCGC
TCTCCTCACCACCGTCGTGGCAACTGCGGAACGGGACTACGGCGAGTACTGCCGCGTGGG
AAAGTCGATTCCCATCAACCCTCTCCCCGCTTGCCGAGAGTACATCACGCGCCGGTGCGC
CGTCGGAGACCAGCAGGTGCCGGATGTCCTCAAGCAGCAGTGCTGCCGGGAGCTCAGCGA
CCTGCCGGAAAGTTGCCGGTGCGATGCCCTGAGCATCCTAGTGAACGGCGTGATCACCGA
GGACGGCTCCAGGGTCGGCCGGATGGAGGCGGTGCCGGGCTGTGACAGGGAGAGGATCCA
TTCCATGGGGTCATTTCTCACGGCGTATAGTGAGTGCAATCTGCACAATCCGGGTACCCC
TGGAGGGGACTGCGTGCTGTTTGGTGGCGGCATCAGTTAGTTAGCTCTAGGTAGTACTCA
AAGTCTCAAATAAATGTTGCATGAGTCGATTTGTGGTTGTGGTGCATGCATCCGTGGTAT
CTCCCTCTCCCCTAATAATAAAGCGCGCAACGCTTCTGCCGTCCGTCATGGCGGTTTTGC
AAAAAAAAAAAAAAAAATGTTTTGTGTATTCTGTTGAAATTGGNAAGGTGGGCCTTAGGC
CCATTAGAGAATTTCATTTTAANAAAAAAAAA



Homology of Contig U35_850 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None