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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_1350_PI390587928Hv_44K_v2GGATAGATGGAGAGAGAACCTTGGGATTAGCTGCTTCTGCTCGGACGTGGATGCATGATG599GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_2337.19322e-24253 - 31210060 / 60minus ABC02006 ABC02010 ABC02012 ABC48277
JLOC1JLOC1_1404.18978e-25222 - 28110060 / 60minus
Harvest21ABC373946593e-25600 - 65910060 / 60plus
Harvest21ABC020109153e-25557 - 61610060 / 60plusABC02010
Harvest35U35_420426593e-25600 - 65910060 / 60plus
Harvest35U35_148649153e-25557 - 61610060 / 60plus



Contig Sequence (659 bp)

>U35_42042 659 Hv_44K_v2
GCTCACCGCTTGCATTGGCACCGTCCCAAGAGTGGCACAGGAAAACCCATCGAAAGCTTC
TTTGATCTCGATCGCGCAAACCATTCGCTCTCACGCACCACTCCACTAGTAAACAAAAGA
TTCATCAGCAGCTTCTCGACAGCCCGCCGACGATGTCGCTGATCCGCCGTGGCGACGTGT
TCGACCCCTTCTCGCTCGACCTCTGGGACCCCTTCGGCTCCGGCAGCGGCAGCGTCTTCC
CGCGCACCACAGACTCCGAGACCGCGGCGTTCGCCGGCGCGCGCATCGACTGGAAGGAGA
CGCCCGACGCGCACGTGTTCAAGGCCGACGTGCCGGGGCTGAGGAAGGAGGAGGTGAAGG
TGGAGGTGGACGACGGCAACGTGCTGCAGATCAGCGGCGAGCGGAACAAGGAGCAGGAGG
AGAAGACCGACACCTGGCACCACGTGGAGCGCAGCAGCGGCAGGTTCCTGCGCAGGTTCA
GGCTCCCGGACAACGCCAGGGCGGAGGAGATCAAGGCGGCCATGGAGAACGGCGTGCTCA
CCGTCACCGTGCCCAAGGCGGAGGCCAAGAAGCCCGACGTCAAGCCCGTCCAGATCACCG
GATAGATGGAGAGAGAACCTTGGGATTAGCTGCTTCTGCTCGGACGTGGATGCATGATG



Homology of Contig U35_42042 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g15960.11623e-76protein|hsp20/alpha crystallin family protein, putative, expressed
Brachypodium v1_2Bradi1g67040.11524e-80
Arabidopsis v10AT3G46230.11565e-59| Symbols: ATHSP17.4, HSP17.4 | heat shock protein 17.4 | chr3:16984263-16984733 REVERSE LENGTH=156