- Probe CUST_13258_PI390587928
- Source Contig U35_20876
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_13258_PI390587928 | Hv_44K_v2 | TTGACTACTCGTGGCGATATTCATGATGCATCTTCACTGAGCCAACAAAGGATGCGTAAG | 656 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK354365 | 2392 | 2e-23 | 642 - 699 | 100 | 58 / 58 | plus | ABC11808 |
| MLOC | MLOC_33189.2 | 2585 | 2e-23 | 350 - 407 | 100 | 58 / 58 | plus | ABC11808 |
| MLOC | MLOC_33189.3 | 2845 | 2e-23 | 483 - 540 | 100 | 58 / 58 | plus | ABC11808 |
| MLOC | MLOC_33189.5 | 2831 | 2e-23 | 331 - 388 | 100 | 58 / 58 | plus | ABC11808 |
| MLOC | MLOC_33189.6 | 687 | 2e-23 | 331 - 388 | 100 | 58 / 58 | plus | None |
| MLOC | MLOC_33189.4 | 3039 | 2e-23 | 468 - 525 | 100 | 58 / 58 | plus | ABC11808 |
| MLOC | MLOC_33189.1 | 4533 | 2e-23 | 666 - 723 | 100 | 58 / 58 | plus | ABC11808 |
| JLOC1 | JLOC1_21534.2 | 674 | 1e-23 | 318 - 375 | 100 | 58 / 58 | plus | |
| JLOC1 | JLOC1_21534.1 | 2625 | 1e-23 | 420 - 477 | 100 | 58 / 58 | plus | |
| Harvest21 | ABC35525 | 637 | 3e-25 | 558 - 617 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC14062 | 739 | 4e-24 | 562 - 619 | 100 | 58 / 58 | plus | |
| Harvest35 | U35_20876 | 736 | 3e-25 | 657 - 716 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_20877 | 740 | 4e-24 | 563 - 620 | 100 | 58 / 58 | plus |
Contig Sequence (736 bp)
>U35_20876 736 Hv_44K_v2 GTCAGACGGTGAGAGGAGCCGGTTCCTTCGCCGTACCTTTTCTTTCCTCTTCCCCTCGCC AGTCCCGACTCCCGACTCCTGACCTACCAATCTCGACCTACATCACTACAGCTAGCGTGC GTCTTCCACCGCGTGGCCGCGTGGCCTACAACAAGCCGCCGCCGCCGTGCCGTGCCGTGC TGTGCCCATACCCCACGGCCGCCGGCTGACGCTGACGCCCCCCCTCAAACCTCTCCACCT TCGCCGTTCCTGTTCATGCTCATAGCGTCCCTGTCCCTGCTTGTCCCTTCCCCGCCCGCA AGCCGCAACCTTTGGCCACTGGATTTAAAGGTAGTGTACTGATGAAGACAGAGATCGAGG AGGAAGTCACCAAAGGGTCCTGGACTGAGGAGGACAAATCCCTTTGTGCTTCTGTGCTGG GCTTAGATGCCTTCACATATCTGACAAAAGGTGGAGGTGCCATATCTGAAAATCTTGTAG CAGCGTCTGTGTTGGTGGGCTTGCAAAATAAACTCCAGGACCTGGTTGAAGCTGATGGTC AAAGCCTTTGCTGGAACTATGCCATCTTCTGGCAACTCTCCCGCACCAGATCCGGTGAAC TTGTCCTTGGCTGGGGTGACGGGTCTTGCCGTGAACCCCATGATAATGAGATGAACTTGA CTACTCGTGGCGATATTCATGATGCATCTTCACTGAGCCAACAAAGGATGCGTAAGCGAG TGTTGGAGCGACTGCA
Homology of Contig U35_20876 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |