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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_13240_PI390587928Hv_44K_v2CATATAGCAGCAAGAGATCGACTTAACTGCCGTGTCCATTTCGAGCCATTTAGCATGAAA14GeneList: brown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.4892.9901.1120.8110.3480.427
Raw 399.849745.797240.368287.20041.44654.843



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC430125443e-2515 - 7410060 / 60minusABC43012
Harvest35U35_448325443e-2515 - 7410060 / 60minus



Contig Sequence (544 bp)

>U35_44832 544 Hv_44K_v2
TTTTTTTTTTTTTTTTTCATGCTAAATGGCTCGAAATGGACACGGCAGTTAAGTCGATCT
CTTGCTGCTATATGCAAGCTACAGAACGATTGGATATACGACCAGGATAAGCAACCATGT
GCCAACATTCAAACCACCCGATTTAGTTCACAACATTCAAACCGTATTTTGTCGATGGCT
CACAAAAACCTCCCAAGTTTCCATCTGGACAAAACATAACCCTAAAATTCGAATGTTGTG
ACTGCATCTTCAGGTAGCTGTTGCATCTTCCGCCGTTGCGTAACCTCCCTACCGCAAAAA
GTTGTTAGCCAGCCACTTGGATCTTACGCAACGCCAGGTATCGCTATCCTACTGCCACCT
CTTCCTTCAAACAGCCAAAACAGGAGTTTGACATCAGTAGGTCATCATGCCAGGGTATGA
CTCTTGCACTGAAGTTGGAACCTTGGGGCCACATGATCCCCAATTACTTTTTCTTCTTCC
TCGGTGAACATAAACCACTTGTCACTGTTCCCTGTTGTGTCAAACTCTGATACAAACATG
ATAT



Homology of Contig U35_44832 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None