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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_13238_PI390587928Hv_44K_v2TAATTGTTCGCTTAATCTTGCATGTGTTTTCATGTGTGCAGACCAAGGCTGATGCGCCAG522GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_74165.412232e-24533 - 59210060 / 60minus ABC17160
MLOCMLOC_74165.123872e-241698 - 175710060 / 60minus ABC17160
MLOCMLOC_74166.211472e-24533 - 59210060 / 60minus ABC05548 ABC17160
MLOCMLOC_74166.311032e-24490 - 54910060 / 60minus ABC05548 ABC17160
MLOCMLOC_74165.223542e-241665 - 172410060 / 60minus ABC17160
MLOCMLOC_74165.311992e-24510 - 56910060 / 60minus ABC17160
MLOCMLOC_74166.422912e-241672 - 173110060 / 60minus ABC05548 ABC17160
JLOC1JLOC1_49413.822938e-25550 - 60910060 / 60plus
JLOC1JLOC1_49413.724028e-25626 - 68510060 / 60plus
Harvest21ABC430265913e-25523 - 58210060 / 60plus
Harvest35U35_448355913e-25523 - 58210060 / 60plus



Contig Sequence (591 bp)

>U35_44835 591 Hv_44K_v2
GCGAAGCTCGGTGTCGGCGGCGGGGAGGCGCCCGGGGATGCAATGGAGCCGGCGGTGCGC
GTGGAGCTGGAAGGGCTCGGTGAGGACAACTGCCGGGAGGGGTTGTGCAGGCGACCGTCG
CCCCATCCCCTCCGTCCTCTCCTCGAGGCCCAGTTCGAACGGGAGGCCATGGCGGGCCCA
GATTCGTGGTGGATCTGGAGGACAAGACCTCGATCCGGAGGCATTTGTCAGCGACGTCGC
CGTCCCGGCCGCCACCCCGCGGGTGGGATCCGCCGGCCCCAAATCCGCGTCAGGTAGTAC
CTTCACCCTGGTTCGTCGCCCGTGGCCGCCGGATCTTCGCTGTTTTGCATGCGTATTTCT
CTGCTGCAGCGGTGAGGAGCGTGCGTGTGGCCAGATCGGGCGTGGGCGCGCGTCCCGAAG
GGAGGCTGGTGGCGTCCGCTGCCGTTGCAGATGCGTGCTCTGTTCTGTTCTAAGAACTTC
TCCTTCGTAATTNTGTTGCTTGTGGGCATCTATTGGTGAACCTAATTGTTCGCTTAATCT
TGCATGTGTTTTCATGTGTGCAGACCAAGGCTGATGCGCCAGCAAGCGAGG



Homology of Contig U35_44835 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None