- Probe CUST_13045_PI390587928
- Source Contig U35_37968
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_13045_PI390587928 | Hv_44K_v2 | TAGTTACAGTACCAATCCCTATGCAGAATTCAACATATTTGGAGATCCTTTTGCTGCATA | 48 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_55035.2 | 3125 | 2e-24 | 2167 - 2226 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.11 | 3052 | 2e-24 | 2095 - 2154 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.10 | 2646 | 2e-24 | 1974 - 2033 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.9 | 2612 | 2e-24 | 2011 - 2070 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.8 | 2405 | 2e-24 | 2005 - 2064 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.16 | 653 | 2e-24 | 40 - 99 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.14 | 2240 | 2e-24 | 1621 - 1680 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.1 | 3757 | 2e-24 | 2751 - 2810 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.6 | 3550 | 2e-24 | 2571 - 2630 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_55035.7 | 3029 | 2e-24 | 2050 - 2109 | 100 | 60 / 60 | minus | None |
| JLOC1 | JLOC1_35469.3 | 2494 | 8e-25 | 914 - 973 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_35469.2 | 2317 | 8e-25 | 914 - 973 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC33730 | 108 | 3e-25 | 49 - 108 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_37968 | 108 | 3e-25 | 49 - 108 | 100 | 60 / 60 | plus |
Contig Sequence (108 bp)
>U35_37968 108 Hv_44K_v2 GCACAGCTTGTACACACAGCAATGTGGTGATATTGGTAACCTGTTCTCTAGTTACAGTAC CAATCCCTATGCAGAATTCAACATATTTGGAGATCCTTTTGCTGCATA
Homology of Contig U35_37968 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |