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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12969_PI390587928Hv_44K_v2GGTGTAGGATGCCTGACCTTCTAATTTCTAATACTAACTTATCATATACTGTATACACTC416GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_49050.11872e-249 - 6810060 / 60plus None
MLOCMLOC_71885.116797e-23229 - 2889859 / 60plus None
MLOCMLOC_30987.114957e-231171 - 12309859 / 60plus ABC08511
MLOCMLOC_30987.314697e-231140 - 11999859 / 60plus ABC08511
MLOCMLOC_30987.417187e-231389 - 14489859 / 60plus ABC08511
MLOCMLOC_30987.218857e-231549 - 16089859 / 60plus ABC08511
JLOC1JLOC1_47796.116984e-23233 - 2929859 / 60plus
JLOC1JLOC1_20426.214814e-231148 - 12079859 / 60plus
JLOC1JLOC1_20426.117304e-231397 - 14569859 / 60plus
Harvest35U35_472136433e-25417 - 47610060 / 60minus



Contig Sequence (643 bp)

>U35_47213 643 Hv_44K_v2
TTTTTTTTTTTTTTTTTACATCCAAAATTCCATAGCATCCATATATACATATAGTTCCAT
AGCATCCATACATACATAGCTCCATAGCAAATATAATACACAACGATACTTTGCGGGCAT
TAGTAAGTAATATTTGACACTAAAACAAATGCCTTCATGTCCATATCTACTAAAAAATGG
AACACTAATTTTGGCATCATAAACTATGCAGTGCTTGCTATCTGCTCAAGCACTGTGTGA
AAAAAATGCTAACATTTTAGATAGCAGTAAAAAGAGACTCGGAAGAATTCAACACTGTGA
TTCAGCACTTGGTTGTCTGTCAAGTAAAGTTCGAATGGGTCCATGAAACATCGCGAAAAG
CGAATGAGATTCTTTCAGTATTCCTTGCAATGCCCACAAGCGAACTAAGATCTGCAGAGT
GTATACAGTATATGATAAGTTAGTATTAGAAATTAGAAGGTCAGGCATCCTACACCAGAA
ACATTATCAATCCGGACTGGAAGGTGATGAAGATGAAGTCTCTTTTACGCATTTTTTTTC
TCCAAACTGATGGCGCATGTTTAGTGTCTACGTCTCTACCTACCATGATAGGGAAAAAAT
AATGCAAAAAGTAACGCACGCTCTATCTGTGTGCTGCCATCTG



Homology of Contig U35_47213 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None