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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12770_PI390587928Hv_44K_v2TTCATTTCTGAATATTTTCGTATAGGCAAAAGATAGGCGGCGGTCGACTCTCTCAAAAAA585GeneList: lightgreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3190.2570.5211.7462.6894.407
Raw 258.679278.433573.3662805.4701596.4402872.993



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC186396563e-25586 - 64510060 / 60plusABC18639
Harvest35U35_244346563e-25586 - 64510060 / 60plus



Contig Sequence (656 bp)

>U35_24434 656 Hv_44K_v2
CGTCATCTTGCTGCTCTTCCCCGTCCTCCTTTCGGCGGCTGAGGCGTTTGCGAATGCGCC
GCCGGCCAGTGCTAACATGATACTTGCCGCATGCAAGACCGTCGGCGGCGGGAGCACCTA
CTTCGACGTCACGTTCTGCTTGGGTGCCCTCCGCTCCGCGGGCGGCGCCGGCGACTACCA
AGGCCTCGCCGCCGTCGCCTTGGACCTCCTCGCGACCAACGCCACCAGCACGGAGGCCAA
GATCGACCGCCTGCTTGGTATCAGCGGCGCGGAGGTCAAGGCGGATGGCGCCGCCCTGGC
GCGGTGCCTCCGGTCGTGCCAATCGATGTACGGTGGCATAGTGGACGACGAGCCTGCGTG
CACCGCTGCGGTCAAGGGCGGGAGGTTCGGCGAGGCAACAGCGATCCTGGAGAAGGCCGC
GGCCGCGGCGAAGGAATGCGAGGGCGGGTTCGAGAAGAGCAAAGCGGCTTCGCCTCTGAC
GACGGAGAACGACAACGCGTTCAAGCTCGCAAAACTCGCCGTTGCGTTGCTCCGTTTTGC
GTAAGAGCCCGGAAAGGGACATTGTTTTTTTTCTCTCTCTCTCTTTTCATTTCTGAATAT
TTTCGTATAGGCAAAAGATAGGCGGCGGTCGACTCTCTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_24434 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None