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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12728_PI390587928Hv_44K_v2GTGCTATAGTTCATGTTCAGGCCCTTCTTTTGTACAATTGGCTGTTATAGAATTTTCAAA33GeneList: purple
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.3850.6950.9291.7721.0461.332
Raw 156.147453.735518.5871592.335324.081446.873



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_507186553e-2534 - 9310060 / 60minus



Contig Sequence (655 bp)

>U35_50718 655 Hv_44K_v2
TTTTTTTTTTTTTACTGGATAAATTATTATTATTTTGAAAATTCTATAACAGCCAATTGT
ACAAAAGAAGGGCCTGAACATGAACTATAGCACTATGTTATAAGTAGTTAGTCATCGTTG
TAACCTTCAACATTCAGTCTTCTTCTGGATCTTCTGGGCGCGGTAGGAAGTCCCAATCTT
CCTCTCTCATATCAAATTTTTCAGTAGTTTCTTCATCAAGCAGTAAGGTATGCATTCCAG
TGTACTCATCATAGTCATGTACAACTGCTGGGACATACATTTTGTCCCGTCGATCCCATA
AACGGATGATTTCCCCAATACAGTTATCTGAGGTTGTCTTTCTTTTCTTCATGTCATGCT
GATCTTGTGAGTTTGCTGAGTTACCATTGTGGAGAATAAATGAGTTGACCGACTTAGACG
TGCCAACCATTTTTCTGCAGTTTGAAGATCCACAATGACAATCTTGGTCTGCTCCAAACT
GGACAAATTTATAGTCATAGGTCAGCTCCTCCCCTCTCTCTATGTCACGAAGAGCAAAAA
TTCCAACTCGGGTCTCTCCATCTACAGTCCATTTCTGCATCTCTGTGTTTGGTTCACAAC
TATGATTGATGAACCTGGACTTGTTCCCCTTGTTTGTTGCATCAATGCCTCGTGC



Homology of Contig U35_50718 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os09g13740.13957e-90protein|SET domain containing protein, expressed
Brachypodium v1_2Bradi1g20527.12932e-113
Arabidopsis v10None