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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12702_PI390587928Hv_44K_v2TGGTGTATATTGGTATCTGTTCTCTTTTTGGGTCTCTGTCGGTCATGAGTGTCAAAGCTC612GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36423618152e-24847 - 90610060 / 60plus ABC16501
MLOCMLOC_15034.25452e-24399 - 45810060 / 60plus None
MLOCMLOC_15034.115412e-24621 - 68010060 / 60plus ABC16501
JLOC1JLOC1_10291.116008e-25622 - 68110060 / 60plus
Harvest21ABC211517093e-25613 - 67210060 / 60plus
Harvest35U35_244587093e-25613 - 67210060 / 60plus



Contig Sequence (709 bp)

>U35_24458 709 Hv_44K_v2
GGACCTACTAAGGGGACCGCGGCGCCGGAGGCGACGGCGGGTTTTCCGAGATGAGCGGGG
AGCGGCGGGGGAGCTGGGTGGTGTCCTACACCGGGATGTCCGCGGACAACATCAAGGGCC
TGCTGCTGGCGGTCTCCTCCAGCCTCTTCATCGGGGCCAGCTTCATCGTCAAGAAGAAGG
GGCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGTGTTGGTGGCTACTCTTACCTGC
TTGAGCCACTGTGGTGGATAGGACTGATAACAATGGTTGTTGGGGAAATCGCTAACTTTG
CTGCATATGCTTTTGCCCCTGCTATCTTGGTGACTCCACTTGGTGCACTTAGCATAATTA
TTAGTGCTGTTCTTGCACGTATCATTTTGCGGGAGAAGCTGCACACATTTGGTGTACTCG
GGTGTATTCTTTGTGTTGTGGGTTCGACAACAATTGTGCTACATGCCCCTCCGGAACGTG
AAATTGAATCTGTGGCAGAAGTATGGGATCTTGCTACTGAACCAGCATTTCTACTTTATG
CAGCCATTGTGCTCGCAGCAGCTTTCGTGCTCATATTCCATTTTGTCCCAAAGTATGGTC
AGACACATATTATGGTGTATATTGGTATCTGTTCTCTTTTTGGGTCTCTGTCGGTCATGA
GTGTCAAAGCTCTTGNGATAGCCTTGAAGCTGACATTTTCAGGGATGAA



Homology of Contig U35_24458 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g35060.13594e-86protein|DUF803 domain containing, putative, expressed
Brachypodium v1_2Bradi2g24880.13613e-98
Arabidopsis v10AT1G34470.13682e-81Protein of unknown function (DUF803) | chr1:12604574-12606758 FORWARD LENGTH=368