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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12461_PI390587928Hv_44K_v2GTGATCCGTTGGTTTCTTCCTTCACATGTTTGGCAATACATATAGTTTTCTAAGCAAAAA11GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.4161.2821.0350.9670.4100.471
Raw 205.479295.970206.561305.37646.18356.481



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC395206683e-2512 - 7110060 / 60minusABC39520
Harvest35U35_431666683e-2512 - 7110060 / 60minus



Contig Sequence (668 bp)

>U35_43166 668 Hv_44K_v2
TTTTTTTTTTTTTTTTGCTTAGAAAACTATATGTATTGCCAAACATGTGAAGGAAGAAAC
CAACGGATCACCACAAAATAACTAAAGTAGTACTCCTGGCGTCATGAAAGTTTACTTGAT
ACAACAGAACATGCACCATTTTACACAAGTTAAGCTAGATATACACGTTGTTGAGACATA
GAACTGGTACCATTTTACACCAGTTAAGCAAGAAAATACAGGCTGCTGAAACATATACAT
AGATCATAGCCCTTCAATAGGTAAATCAGTTGAGGCCTGACACCGGGCGACATGGCAATA
TCACTACATCGACATTTGAATCTATTCAAATCGCATCTCAACGGGAGTCTGTCCTTCATA
TGAATGGAACAGGGACAAGCGCACAATCCAGGTAGACAAAACACAGCAACCTCATGCTGC
CAAGATTAATTCAGGGACATCTACTTCGGCTGCTGGAAACTGAACCTGAAAGAACTCCAG
GAATCATGTTCGATGCTAATTTGCGCAGAAGTTACTCCATGAATGCCAAGGATGTCCACA
ATTTGACAAATCCATTCATCCTCCTTGCTACAATGGATTTCAACTACCTTGAGATGCTTT
GACACCAAGAAATATTCCGCTGGGGTTGTAGCTTCCACTTGATCCAATGTCAAAATCCTT
GCGAGCTG



Homology of Contig U35_43166 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None