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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12314_PI390587928Hv_44K_v2AATCACAAGGATCATGATTACTCCATCATGGAAACAGGCGGTGGATGTTGTGATTGTGGG545GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_55623.144812e-24697 - 75610060 / 60plus ABC06680 ABC06681
MLOCMLOC_55623.246452e-24861 - 92010060 / 60plus ABC06680 ABC06681
JLOC1JLOC1_35907.341168e-25520 - 57910060 / 60plus
JLOC1JLOC1_35907.245858e-25774 - 83310060 / 60plus
JLOC1JLOC1_35907.143398e-25672 - 73110060 / 60plus
Harvest21ABC478736953e-25546 - 60510060 / 60plus
Harvest21ABC278936313e-25519 - 57810060 / 60plus
Harvest35U35_470766953e-25546 - 60510060 / 60plus
Harvest35U35_288176313e-25519 - 57810060 / 60plus



Contig Sequence (695 bp)

>U35_47076 695 Hv_44K_v2
GGTACGTCGTCGCCTAGAGTGAGTTGGGGAATTTGTTTGGGGGTTCCGTTCCTGTGCCGG
CTGCGGGGAGGATTCGTGCGGGGCTTGATTCGGCGACGCTGCTCGCCATGGCCGGGATCG
ACGACGGCGGGGCCGCCGCCGCCGCCGCGCAGCTGGTGCAGAAGCTGGCAATCTGTGGAG
TTCCAGAAGAGCAGCAGCATCAAGAAGGCTTGCTCGTGTATTTGGAGGAGCACAATGATA
AGATTCCTCAGATCACGGCGGCCATCTTGTCAGCAGGCACGGAATTAATGGAGTCCGGCA
ACTCATCGAAGGATAAAGATGACAGTAGCTGCAGCAGCAATGCATACAGTGAGAGCCTGT
CGTGGTTGCAGTGGATGATGTTCGGCAGAAATCCCGATGCAATGCTTCATGACATGGAGC
TTAGCTCCGAGGATGACCGCGCTGTTTGCGGCACTGTATGGGGGCAGAATTGCCTTGCTT
ACCGCTGCCGGACCTGCGAGAGTGACTCCACATGCGCAATTTGCGTTCCATGCTTCCAGA
ATGGCAATCACAAGGATCATGATTACTCCATCATGGAAACAGGCGGTGGATGTTGTGATT
GTGGGGATGCTACTGCTTGGAAGCCTGAAGGGTTCTGCTCGAGGCACAAGGGGGCCGAAC
AAATTAAGCCTCTTACCAAGGAGCTTGCGAGTTCC



Homology of Contig U35_47076 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g05500.220574e-67protein|zinc finger protein, putative, expressed
Brachypodium v1_2Bradi2g03180.120812e-72
Arabidopsis v10None