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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12279_PI390587928Hv_44K_v2ACTGGCCTGGACATTATTCAGTCCTGTGATAACCAATCCCGCGGTTTAACTGGTAAAAAA1084GeneList: darkolivegreen
MasterList: Cell_cycle_Function_Probe_Module



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.2520.3900.7331.5761.5512.070
Raw 107.613263.873429.3061435.070492.606717.443



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC0864911533e-251085 - 114410060 / 60plusABC08649
Harvest35U35_388311533e-251085 - 114410060 / 60plus



Contig Sequence (1153 bp)

>U35_3883 1153 Hv_44K_v2
TCCCAGGCAGCATCAAAGGTCGCTGCTGCTGTTCCAACCGAAAAGGCGAGGAGCGGCGGC
CGTGGGGAGGAGTGTGAGGCCGCGAGCTCGAGCTCGAGCTCGGCCCTGAAGAACAAGAAG
AAGGCCTCCTTCCCTACCCCCCGAGCTCAAGCCCAGAGCAAAGCCCACTTATGCCTGCCT
ATGGAGTCATCTAAAACTGATGCCGGTGATAAGCATTTGGAGAGCTACCTGACACTGGGT
TTGACAATACCACAGTCAAAGAAAGGGGATACCAACTTTCCAAAGGTCCTGTCGCTTCTT
GCCACATATCTGGGCAGATCAGTTCAGAAGAATGAACAATTACTAGGTTCTGATAGAATA
AAGGAGACGACCACTATTTTTCATGGACAGAGAGTCCCAGATCTTAGTATACAGCTCTAT
GCAGAGCGCATTTTCAAGTATGCCGAGTGCAGTCCATCTTGCTTCGTGTTGGCACTTGTC
TACATGGAGAGATATCTACAGCAGCCAAATGTGTACATGACGCCCTTTAGCGTTCACCGG
TTGCTAATCACAAGTGTGGTGGTTGCTGCCAAATTCACAGATGATGGGTTTTTCGACAAT
GCGTTCTACGCTAGGGTTGGAGGAATCAGCACAGTCGAGATGAATCGGCTTGAGCTGGAT
TTGTTGTTTAATCTGGACTTCAGGCTGAAAGTGAACCTAGAGACATTTGGGAGCTACTGC
TTGCAGCTGGAGAAACACGCACCGGTGTCACCAGAGAGACTCCCGGTTCAGGTTCATTGT
GTCAAGGGATCTAAAGATTTGAGCTATAGCAACAGCAGCGCCGACGAGTTTTGCCAGAGC
AAGCTAGTGCGCCAGAGCTACAGCAGCCAGGCTCTCCAAGGATGTAGCTGACCAATCTAT
TTACGACCTGCAGTTTTGCAAAGATTACTGATTATTCGTTTAGATCTGACATTTGTGCAT
TCGGATTGCATTAAATTGTTCTGAGGGTGTTTGATTAGTAGGGATTCGATTCTGTTTTAC
TTCTGTAACACTGTAATTCTTGCAAACCACTCTGTTTAAATTTGCACAATCGAGTTGGGA
AACAACTGGCCTGGACATTATTCAGTCCTGTGATAACCAATCCCGCGGTTTAACTGGTAA
AAAAAATAAAAAA



Homology of Contig U35_3883 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g33040.12372e-115protein|cyclin, putative, expressed
Brachypodium v1_2Bradi2g26090.32363e-132
Arabidopsis v10None