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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12257_PI390587928Hv_44K_v2ATGTGTACTACTGTGCGACTGATATATGATGATGCTCCTTGAATGCTTTGCCTCAAAAAA934GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.0361.6261.0970.7980.3590.353
Raw 24938.86730626.86718615.43321120.5933358.5303602.240



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC195512401e-23163 - 2239860 / 61plusABC19551
Harvest35U35_2090810053e-25935 - 99410060 / 60plus



Contig Sequence (1005 bp)

>U35_20908 1005 Hv_44K_v2
TCGAGCACTGTTGGCCAGAAGACAGAACCCACAAAACCCTACGAGCAAGCCGCCGCCGCC
GCCACCGCCACCGCCACCGCCACCGCCTCCCTTTCCGCGGCTACGATCTCCGGCCACCCT
CCCACGCCCACCCCCAGCCATGGCCGAGCCCGAGGTGGCGGCCGCCGCAGCCGCGGCCAT
GGAGACCGAGGCCCCGGATGCGAACCCTAGCCTAAAGAGGGATCGCGAGGAGGGGGACGA
CCCCGCCGCCGGGGCTGCGGCCGAGGAGGCGGAGGAGGCGCCGGCCAAGAAGGCGAAGGT
GGAGGAAGAGGCGAAGAAGGCGGAGGACGTCGCGGCGCAGGGGGAGGAGGAGGGGGCCAA
GGGAGAGGAAGGGAAGCCCGTCAAGTTGGGGCCGAAGGAGTTCGCCACGGCCGTGGACAT
GTTCGACTATTTCTTCGCGCTGCTCCACACGTGGTCGCTGAACCTCGAGTTCAATAAGTA
CGAGCAGATGGTATTGGAGGACCTGGTGAAGAAAGGCCATGCTGAGTCCACTAAGAAGAT
TGGATCAGGCGTGGATGCCTTTGAGATCCGCAACCACCCGGTGTGGCAGAGCCGATGTTT
CTTCATCCGCAGGGTCGATGGTTCTGCTGATGATTTCAGCTTCCGCAAGTGCGTGGACAA
CATACTTCCTCTCCCCGAGGACCTGAAGGCTGGCAACAAGAATTCAAATGGCAAGAAGGG
TGGCCACTACAAGGGCGGCGGCGGTAGAGGAGGAGGACGAGGCGGCGGCGCCCGTGGTGG
AGGTGGCTTCCGTGGCGGTCGCGGCCGGGGCAGGCGGGGCAACTAGGAACCAACAATATT
CCCCACAATTTTGGGTGCCCAATGCCAATCCTTGCAGCTGAGGCATTTATCATGAGCTAT
GCGTGTTTGTTTGCCCGTCCTAGAGACCTGTTATATGTGTACTACTGTGCGACTGATATA
TGATGATGCTCCTTGAATGCTTTGCCTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_20908 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g08810.12332e-59protein|expressed protein
Brachypodium v1_2Bradi1g72100.12375e-62
Arabidopsis v10None