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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12064_PI390587928Hv_44K_v2CATCATGATCACACAAGGCTGAAGAAACTTAATCTGAATTCTCACTGTTCATTCCAAAAA412GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.8031.5801.4820.6800.6220.340
Raw 33.77946.86937.25926.8717.7863.138



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_72904833e-25413 - 47210060 / 60plus



Contig Sequence (483 bp)

>U35_7290 483 Hv_44K_v2
CGCGGGGCACCCGGCCGCGACGCCGGAGAACGCTGCGGCTTACAACGGGAGGATGGCGGA
GCGGGCGGCGCGGGGCGTCGGCACGCCGCGCCGGCCCGGGGCGCCCGTGGAGGTGTTCCT
GTTCGACCTCTACGACGAGGACGGAAAGCCCGGCACCGAGTTCGAGCGCCACTTCGGCAT
CTTCCGGGCCGACGGCGCCAAGGCCTACAACATCAACTTTGCCTAGTAGAGCTGCTTGTA
TGGAGATGATAAGCACGCTGTTGATCTGTGGATCAACCGGCCGATATGCTAACGTGATCT
ACCGATGTATCTCCTGCTAATCTGTTATGTTAATTGCTACGACTTGCACTTCATGATTTC
ATAAGAAAAAAAAAAACTCCTGTTGATCTGGGCATTGCCGATAATTGGGTGACATCATGA
TCACACAAGGCTGAAGAAACTTAATCTGAATTCTCACTGTTCATTCCAAAAAAAAAAAAA
AAA



Homology of Contig U35_7290 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None