- Probe CUST_11763_PI390587928
- Source Contig U35_45386
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_11763_PI390587928 | Hv_44K_v2 | TCCACTTACGACACGGACGGAAGGTTCATGCCGGTAAATTTCGAGAGCATCTTCAGCAAG | 122 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | MLOC_57234.2 | 601 | 7e-23 | 245 - 304 | 98 | 59 / 60 | minus | ABC49624 |
MLOC | MLOC_57234.1 | 929 | 7e-23 | 229 - 288 | 98 | 59 / 60 | minus | ABC49624 |
JLOC1 | JLOC1_37056.1 | 1128 | 4e-23 | 642 - 701 | 98 | 59 / 60 | plus | |
Harvest21 | ABC44214 | 191 | 3e-25 | 123 - 182 | 100 | 60 / 60 | plus | |
Harvest35 | U35_45386 | 191 | 3e-25 | 123 - 182 | 100 | 60 / 60 | plus |
Contig Sequence (191 bp)
>U35_45386 191 Hv_44K_v2 TTATAGCGGCAATTGGCATAGGTATCGGACTGAGCTTCCCAACTCTACCTAACTGGATAC CATCTCCCTTGTTCCCCATACACATCAAGAACATCCACAGGGATAAGCATGGCAGCGACT CCTCCACTTACGACACGGACGGAAGGTTCATGCCGGTAAATTTCGAGAGCATCTTCAGCA AGTATGCCCGC
Homology of Contig U35_45386 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |