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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11555_PI390587928Hv_44K_v2ATGCTGCTACCAGTGCGGGGGGCATGGCCGTGTCTCTGCTCATGCTAAGCCTGTCTCTTC375GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_13974.219783e-211178 - 12389759 / 61plus ABC19105
MLOCMLOC_13974.119783e-211178 - 12389759 / 61plus ABC19105
JLOC1JLOC1_9512.314822e-21704 - 7649759 / 61plus
JLOC1JLOC1_9512.222122e-211434 - 14949759 / 61plus
JLOC1JLOC1_9512.119552e-211177 - 12379759 / 61plus
Harvest21ABC286845323e-25376 - 43510060 / 60plus
Harvest35U35_294115323e-25376 - 43510060 / 60plus



Contig Sequence (532 bp)

>U35_29411 532 Hv_44K_v2
CTCGCTCGCACCACGGGCGACCCGGCCCTCGCCGACCGCCGCCTCAAGGAGATCGTTTCC
TCCGCGCAGGAAAGCTCGAAGCAGGCCGTCGCCGGCGGCAGAGACGACAAGGCGCCGTCC
ACAAGCGTCTGGCGCGACATGCTGATCCGGCCGACGCGGTCCGTCCGTCGCGTGCTGCTC
GCCATCCTCGGCCTCCAGTTCTTCCAGCAGGCGTCCGGCGTGGCGGCACTCGTCCTGTAC
GCGCCGCGGGTGTTCAACCACGTCGGAATAACCTCCCAGCGCGCGGTTCTCGGCGCCACG
ATCCTCCTCGGCGTCGTCAAGACCGTGTCCATAGTGATCCCGCTTTTCCTGGCCGACCGG
CTCGGCCGGCGTCCCATGCTGCTACCAGTGCGGGGGGCATGGCCGTGTCTCTGCTCATGC
TAAGCCTGTCTCTTCGAGCGTCGCCTATGGCANACGCGGGCGCGAGCGCGAGCGCCCGCG
TGGTGGGCCGCTGCGACGAGCGTGACGGCCGCCGCAGCGTTCATGGCGACCT



Homology of Contig U35_29411 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os12g32760.15144e-53protein|transporter family protein, putative, expressed
Brachypodium v1_2Bradi4g06420.15306e-57
Arabidopsis v10None