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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11546_PI390587928Hv_44K_v2TAAAGCTCACGATTTGCAATGTTTGCTGCGAGATCATCTCCAAAGTTGACGCGCAGATGA413GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0921.8871.0101.1440.4360.429
Raw 20.26751.59725.24842.3964.9525.205



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC286905603e-25414 - 47310060 / 60plus
Harvest35U35_294175603e-25414 - 47310060 / 60plus



Contig Sequence (560 bp)

>U35_29417 560 Hv_44K_v2
CTTTCATCCACACCACGCCGTCCAGCTCGCACCCCAATCGCATCAGCGCCCACACCACAG
CCTAGTGCCGTCGGCCTTGCATCCCCCATCCACCCCGACGTCTTCGCATCCCCCATCCAC
GCATACATCTTCGCATCCCCCATCGACGACGCCTCTGGAACCTGGAGGTCTGGACCGACA
AGTGCAAAGTGAGCGGGGACGACGGCAAACCACCCCTCCCATCAATCCAGGTGATCAGGT
GGGAGAGAACAAGGGTGTGATGTGAACCCAACTCAATACTGCCGCTCGCGGGTGAAGCAG
GAGGCCATTGGTTCTGGTGTATTTGTTTGGGGAATCCTAAGGACTAAAGTAGATTTGCAA
ATCTTCTCCATACCATCAGGTGCTTTTAGATCTCAGTTGAGGTATTCGAATCCTAAAGCT
CACGATTTGCAATGTTTGCTGCGAGATCATCTCCAAAGTTGACGCGCAGATGAGCGGCAC
CAGGGAAAAATTCGACGGCAAGGCGGAGATCTGCGCTGCCATGGTCAACGAGATGGGAGA
CCACACTGCTCATCATAGCT



Homology of Contig U35_29417 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None