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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11442_PI390587928Hv_44K_v2TATTCTGGCCTGGAGACCTCATTCCTCGGTTGAATTCCATCCATTTGTAGTCTCAAAAAA899GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1301.6061.3320.9490.5140.439
Raw 208.009466.155329.854375.92670.27065.925



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_90179633e-25900 - 95910060 / 60plus



Contig Sequence (963 bp)

>U35_9017 963 Hv_44K_v2
GCCTAATTGGCTGCGATATTGTGATTAGATTCAGTTTGTGGTAGAAGAACGGTGCCAGTC
CTTTCTCGAGTTATTCCATCCACACGCAGCATCGGTCCTGGATTATGCTTCAGATTAACT
CTGTTTCCCCCTCTCTAAAAAAAATGTTTTCCGCGGAAGCAGGAAAGGAGGGAGACATTC
TCCATAATATATCTAATATGTTGCCTAGCACTGGTAGCATGCCATGGACCGGCACTACCA
TAGCATGCTTGATATTTATTTTTAACTTGCAATATACTGAATCTTTCGGTTTAAATCAAA
CAACCCTATTAATGGATATAGCGATATTTGAAGTATAAGTGTGTGGCCTATAGTATTTCT
GCATCCTTGCTTACCTGTTGTAATGAAAGCTATTCCTCTGCATACTGTACTCTTAACATG
TCTTTGCTGTTGAATTGGTGTACAAATACGATAGGTTGTTCGGGTTTCTGAAACCACACT
GTGATCTTGATCTCTTTTTATCTTCATATACTGATCTTCTCCATTGTGAATTTCAGTGGC
AAAGACATTTCCGTGGCCGTATGGCTCATAATCTTCAGAGGGAAGACGCTGTCGCTTCAG
GCTGAGCAGTGGGATGCTGGGCTGCACATCTGGTTAATTCATTGGAACTATACACCGTCT
ATTCTGGCTTATGGTTATCAGGAGCAACTAGGACCCCGTGCTTGTGTATAAAGTGTTAGA
TTAAATTAAACCGGCGGATCGTGCGGAAAAACTGGAGAGATGTTTATATTTTACAGACTA
GTAGTATTATGTTTATACTTTATTATAGACTAGTTGGTGGTTGATGATGGATTGATGGTT
ACTTGGAAATTTCTGTTCCCTTGGTTTATTGAATCTTTGGAGATAGTGCTGCCCATGAAT
ATTCTGGCCTGGAGACCTCATTCCTCGGTTGAATTCCATCCATTTGTAGTCTCAAAAAAA
AAA



Homology of Contig U35_9017 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None