barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11346_PI390587928Hv_44K_v2ATGAGCTTCAAGTCAGGCAACCTATGTTAGAAGATGAAACCCGTGCCGAAATTGAACAGC741GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_37545.233742e-241434 - 149310060 / 60minus ABC16820
MLOCMLOC_37545.133432e-241485 - 154410060 / 60minus ABC16820
JLOC1JLOC1_24315.233328e-251800 - 185910060 / 60plus
JLOC1JLOC1_24315.133238e-251791 - 185010060 / 60plus
Harvest21ABC194029003e-25729 - 78810060 / 60plus
Harvest35U35_239189133e-25742 - 80110060 / 60plus



Contig Sequence (913 bp)

>U35_23918 913 Hv_44K_v2
GATGCATATGATGATCGAACAGACCTGAACTCTCTGAACTGGGCAAAGATGATGAGGATG
TCAACATGGATGACACAGAACAAACCGATGACATGGGTGCTGACGATCCTGACAACGAAG
ATATAGGCCCAGAATAGGGGCAGCAAGAAGATGATAGTGCAGTCGTGTCAGAAGATATGG
AGGAAGACGATGCCACACATGTTGGTGACAATGTGGTTGATAATGAAGGGGATCATGATG
AAGATGGAAATGTGGAGCCAAACAACATGGAGAAGCAACAGTTGGACAAAATGGAGTCAC
TTGCACATCCTTCACAAGGTATACAACCCAACCAATTGGAAACAGACTCTAACAGAGAAT
CTGAAGCAAACTTGGCCAACAGCATGGACATGAGCAGTGGAGTTGCTCCTTCTGTTGATT
TTTCAAGTAATGAAGTGCCTAGTCTGGAAATATCTATGCCCAACTCTGGTGAAGGTTCAA
GAAATTTGTCCAACTCCAAGCCAGAGTTGCAGCCTGATGCTCCACCGTCACACATCAAGC
AGACAAATCCTTTCAGGAGCATTGGAGACGCATTGGAGGACTGGAAAGAACGAGCAAGAG
TCTCAGCTGATACCCAGGATCATCAACCAGAAACTGAACACCATATTGATGATGAGAGTG
CTACTGAATTTCGTTATGTGCCTGAGGGTGAGCAGAGCACGTCTCAAGCATTAGGTGACG
CGACAGCTGATCAAATCAATGATGAGCTTCAAGTCAGGCAACCTATGTTAGAAGATGAAA
CCCGTGCCGAAATTGAACAGCCCGATGAGAGGATACCCGGNGATGACAAGTCTGAAATGC
CCCATCTTCAAACTTCACAATCACGCGCCAACAAGTNCGAAAGTGCCAACAGATTGGAGA
GAAGAGATATTCA



Homology of Contig U35_23918 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os10g31856.111981e-122protein|midasin-related, putative, expressed
Brachypodium v1_2Bradi3g27906.19012e-146
Arabidopsis v10None