barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11335_PI390587928Hv_44K_v2CGGACGAAATTTGTGTTTTCAGGCGACTTTCAAATAGAGAGCCCCTCGTTTACTAAAAAA394GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_34088.116029e-22390 - 44410055 / 55plus ABC10382 ABC20973
Harvest35U35_239204653e-25395 - 45410060 / 60plus



Contig Sequence (465 bp)

>U35_23920 465 Hv_44K_v2
CTGCACGGCGCGTGCACGGTGGCGGAGGCGTGGTGGGCNAGGCACCAGGGGTGGTGGCGA
CCGCCGCGGCTGGTTGCCACCCCGCTGACGCTGGCGTTCGTGCTCGTGACGGCCTTCTGG
CTTTTTTTCCCGCCGATCACGAGGCCCGGGGCCGACAAGCTCGTGATCGCCGAGTGTGAG
GCGGCCGTCGCGTTCGTGCGGGACGCCGGCGCCTGGGCGGCCGGCTCCGTGCGGTCGGTC
TGGACGGGCCGCTCGTAGTACGGAGACGGCCGGTGCGTCACGCCCGATACGCCCGCGAAG
AATGGGCTCGTTGCTCAGGCGGCAATTTGTTTGCGTATTACGCCTGTGGCTGTCGATTTG
TTAGGAAAATGTATCGAAACAAATCCGAGGGCAGCGGACGAAATTTGTGTTTTCAGGCGA
CTTTCAAATAGAGAGCCCCTCGTTTACTAAAAAAAAAAAAAAAAA



Homology of Contig U35_23920 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None