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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11326_PI390587928Hv_44K_v2GATAGTTCTGCAAAATGTACCTGTCAGATGTTTGAATATCTTGGTATTGTCTGTAGGCAT734GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_53826.229872e-241871 - 193010060 / 60plus ABC23513
Harvest35U35_359007973e-25735 - 79410060 / 60plus



Contig Sequence (797 bp)

>U35_35900 797 Hv_44K_v2
CACTCCTATAGGGCGAATTGGGCCCTTTCGAAGATGCTCGAGCGGCCGCTCAATTTCCAT
TCAACACCAAATATGTTCCATCAACACATCCAAAAAGAAGTTCAACAAGAACCACACTGA
AGAGGTTCTACATGAGGCATCTGAGTAAGTTCACTAGGGCAACAATCTAACTCCATCTAA
CATTACAAGATCAGATAAGCAAGCAGAACATCCTGTGAACAAGGCAACACTGTAACCTGC
AGTCAGACCGGAGACCTCAGGCCTGAGCCGTCTCCCTTTCACGGTTCCACTGCTCGATCT
TCGCCCTCCTCTCCTCGCTGCCCTGCCTGGCAGGCGCATCCAGCGGCCGCTGGGATACAT
TCTTTGGAGACGAGCCATCAAGGCAGGGGTGTATGAGCAGGAACTCGTTTTTTGAGTCTC
ACATCACTGCTAAAACTAATTTGCAGTCGTTCATTCAGCACTATGAAAAAGCTCTCGACA
GTTGTTATGAGAGGGAGGTGAAGGAAGAATTCGAAACAAAGTATTCGCTTCCAGACATCA
AGACATCATCTCCTATTGAGAAGCAAGGAGCAGACCTGTACACAAGGACACTGTTTTTGA
GGTTCCAACAGGAATTGGTTGGCGCCTCTGTTTGTACTCTGGAAGTGGCAGAGGAGGATG
GTAAGGCTTGCATGTATAAAGTGACAACTTCTCAAGGAAGTGAGAAGCCCCGTATGGTTC
AATTCAATTCCTCTGATAGTTCTGCAAAATGTACCTGTCAGATGTTTGAATATCTTGGTA
TTGTCTGTAGGCATATT



Homology of Contig U35_35900 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g45300.110678e-69protein|transposon protein, putative, unclassified, expressed
Brachypodium v1_2Bradi1g13310.110645e-76
Arabidopsis v10None