- Probe CUST_11101_PI390587928
- Source Contig U35_9473
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_11101_PI390587928 | Hv_44K_v2 | AACTCACCTAACCTCCGATCAACATTGTACACGCTACTTTATAAGGATGGCACTTTCCAG | 983 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK360630 | 2392 | 2e-24 | 1533 - 1592 | 100 | 60 / 60 | plus | ABC16379 |
| MLOC | MLOC_54671.2 | 2149 | 2e-24 | 1889 - 1948 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_54671.4 | 2006 | 2e-24 | 1717 - 1776 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_54671.3 | 1983 | 2e-24 | 1662 - 1721 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_54671.7 | 1456 | 2e-24 | 1035 - 1094 | 100 | 60 / 60 | plus | ABC16379 |
| MLOC | MLOC_54671.6 | 1350 | 2e-24 | 929 - 988 | 100 | 60 / 60 | plus | ABC16379 |
| MLOC | MLOC_54671.1 | 2789 | 2e-24 | 2074 - 2133 | 100 | 60 / 60 | plus | ABC14708 ABC16379 |
| JLOC1 | JLOC1_35194.8 | 1016 | 8e-25 | 83 - 142 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_35194.7 | 2269 | 8e-25 | 1336 - 1395 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_35194.6 | 2262 | 8e-25 | 1329 - 1388 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_35194.5 | 2319 | 8e-25 | 1386 - 1445 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_35194.4 | 1655 | 8e-25 | 1400 - 1459 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_35194.3 | 1654 | 8e-25 | 1399 - 1458 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_35194.2 | 2335 | 8e-25 | 1402 - 1461 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_35194.1 | 1660 | 8e-25 | 1405 - 1464 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC19497 | 1043 | 3e-25 | 984 - 1043 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_9473 | 1043 | 3e-25 | 984 - 1043 | 100 | 60 / 60 | plus |
Contig Sequence (1043 bp)
>U35_9473 1043 Hv_44K_v2 GCACCATTTTCACTGAGGTTGCTTTTGATATTATAGAGAAGGAGCTTGGGATGCCACTCG ACATGATTTTCTCTGAAATGTCACCAGTGCCTGTTGCTGCTGCATCTCTTGGGCAGGTTT ACCAGGCTAGGTTACGTTCCAATGGGAAGTTGGTTGCCGTAAAAGTACAAAGGCCTGGAG TCCAAGCCGTAATTTCCTTGGATATCTATATCTTGAGGTTCCTCGCTGGTGTTGCCAGGA AGGCTGGCAAGCTCAACACAGACCTTCAGGCTGTCCTTGATGAATGGGCATCAAGTCTAT TTCGGGAGATGGATTATAGAGAAGAAGCGAGAAATGGACTTAAGTTCAGGCAATTATACG GGAAACTTAGAGATGTCATGGTTCCAGAAATGTATCTGGAACAGACGAGAAGACGGGTCC TTATCATGGAATGGGTTGAGGGGGAAAGGTTATCAGAAGTCAGAGATCAATACCTGGTTG AGGTTGGAGTATACTGTTCGCTTTCCCAGCTTTTGGAATATGGATTTTATCATGCAGACC CACATCCTGGAAATCTTCTACGTACAGTTGATGGGAAGCTAGCATACTTAGATTTTGGAA TGATGGGAGAATTCCGACAAGAACTCCGTGATGGATTTATTGAAGCTTGTCTACATCTTG TTAACCGGGATTTTGATGGTTTAGCAAAAGATTTTGTTACTCTTGGTTTGCTTCCTGCAA CTGCTCAGAAAGATGAAGTGACAAAGGCATTGACAGGTGTATTTGAAAGTGCAGTCAACA AAGGAGTTCAAAATATAAGCTTTGGAGATTTGTCAGGGAATCTTGGGCAGACAATGTATA AATTCAAGTTCCAGATACCTTCATACTTCTCTCTTGTGATCCGAAGTCTTGCTGTCTTGG AAGGCATTGCAATAAGCTTCAATCCCAACTACAAAGTCTTGAGCAGTTCATACCCATGGA TCGCAAGAAAAGTTCTCACAGACAACTCACCTAACCTCCGATCAACATTGTACACGCTAC TTTATAAGGATGGCACTTTCCAG
Homology of Contig U35_9473 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | LOC_Os04g54790.1 | 721 | 0.0 | protein| ELMO/CED-12 family protein, putative, expressed |
| Brachypodium v1_2 | Bradi5g23450.1 | 705 | 0.0 | |
| Arabidopsis v10 | AT1G71810.1 | 692 | 0.0 | Protein kinase superfamily protein | chr1:27002602-27007964 REVERSE LENGTH=692 |