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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11070_PI390587928Hv_44K_v2AGGAAAGAAAGGAACCGAGGAGGAATACAATCTGCTGCTCTGTAAATTTGTCGTAAAAAA764GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.4883.1031.8860.7220.1890.207
Raw 5598.59710196.4775568.6873383.059312.569366.376



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC155598353e-25765 - 82410060 / 60plusABC15559
Harvest35U35_76768353e-25765 - 82410060 / 60plus



Contig Sequence (835 bp)

>U35_7676 835 Hv_44K_v2
AATGATGAGCCCTTTCCTGACCCAGCGCACCAAGAGCAAGTTCGTGTTCGCCAGCCAGGC
CAAGTCACCCGAGACCCTCTTCAGATACATCGCGCCGGAGCAAGTCCCGGTCCAATTCGG
AGGCCTCTTCAAGGAAGATGACCCAGATTTCACCACCTCCGACTCTGTCACCGAGCTCAC
CATCAAAGCTTCCTCCAAAGAAGCCATTGAGATCCCTGTCACCGAGAACTCAACGATTGT
ATGGGAGCTCCGGGTGCTGGGCTGGGAGGTGAGCTACGGTGCGGAGTTCACCCCCGACGC
CGAGGGGGCGTACACCGTCATCGTGCAGAAGACAAGGAAGGTCCCCGCGAACGAGGAGCC
CATCATGAAGGGCAGCTTCAAGGCCAGCGAGGCCGGCAAGATCGTGCTGACGATCAGCAA
CGCGGCGTCGAAGAAGAAGAAGCTCCTCTACAGATCCAAGGTGAAGAGCTCCGGCGAGTC
CGTCTGAGGCCAACAATTCATGACCACCGCTGGAGTCCCCGATAGAAGAAGAAGAAGAAG
AAGAAGACAAACCTTTTTGGTTTCTGTTCTTTAATTTCATTGGTTTTGTGGTTTTTGGTT
GGCATTCCCGCATTTGTTTAATTAAAATTGAAAAAACCCAAAGTGAGCTTGATTTTGCGA
CGGTACAGTAGTTGGGAGAGTAGATGGGAGGTTGGTATGGCTGGCATGGATGGGTGGTAT
AATGGCATCGTGATGGTGGTTGAGGAGAAAAATGTGGGGAGCAAAGGAAAGAAAGGAACC
GAGGAGGAATACAATCTGCTGCTCTGTAAATTTGTCGTAAAAAAAAAAAAAAAAA



Homology of Contig U35_7676 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g65380.16143e-79protein|patellin protein, putative, expressed
Brachypodium v1_2Bradi2g56530.25862e-85
Arabidopsis v10None