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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10884_PI390587928Hv_44K_v2TTGTCATCGCCTTCGAGGACGACCACGACGACGACGGTGCTTCCAGGGGTTCCACCAGTA296GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_78328.338632e-24186 - 24510060 / 60plus None
MLOCMLOC_78328.216652e-24186 - 24510060 / 60plus ABC43933
MLOCMLOC_78328.112702e-24186 - 24510060 / 60plus ABC43933
MLOCMLOC_78328.426632e-24185 - 24410060 / 60plus ABC13158 ABC43933
MLOCMLOC_78328.531842e-24185 - 24410060 / 60plus ABC43933
MLOCMLOC_78328.68992e-24183 - 24210060 / 60plus None
JLOC1JLOC1_52204.426248e-25176 - 23510060 / 60plus
JLOC1JLOC1_52204.320838e-25176 - 23510060 / 60plus
JLOC1JLOC1_52204.231528e-25183 - 24210060 / 60plus
JLOC1JLOC1_52204.116438e-25183 - 24210060 / 60plus
Harvest21ABC224365173e-25297 - 35610060 / 60plus
Harvest35U35_262175183e-25297 - 35610060 / 60plus



Contig Sequence (518 bp)

>U35_26217 518 Hv_44K_v2
TCGTGCATGATCCCCCTTCTCCCCCCGCAAGCCCTCTCTCTGTCCCCCTCCCGCGACTCC
TCTGCCGCTGTCACCTGTGCCGCTCGATTCCGGCGAGTTGAGGCGGCTCCTGTCGATGGC
GGCCGGGGGCGGCGGGGTCGGCAGCGACCGGGCGGCTGGGGAGTGCGGGGTGTCCGTGCT
CGCCTCGTCCCGCGGCCTCGCCACCGGCTTCAACTACCTCGCCAACCCGCTCACCTTCCG
CTGTGTGCGCCTCCCCTACCAGACCCGCGACCACCGCCTCGACGCTGACCCCGCCATTGT
CATCGCCTTCGAGGACGACCACGACGACGACGGTGCTTCCAGGGGTTCCACCAGTACCAC
CTCGTCGTCGCCTACGAAGTGCACGACGGAGTGTGGGCGGTCGAGTCCTTCTCCACCCGC
ACCTGTGACTGGCGCGTGGGCGCCGACATCTGCGCACCGGAGATGGTCGTCACGCGGTCG
GGCATTGCCGCGCGGGGCCGTGCCTTCTGGCGCACCAC



Homology of Contig U35_26217 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None