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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10700_PI390587928Hv_44K_v2AGATAAAGTTATGCAAGGTGTTTGCATTGAAAACGCTATGCTTTGGCGTGCTGGGTGTCC667GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37310930282e-24626 - 68510060 / 60plus None
MLOCMLOC_15055.611042e-2493 - 15210060 / 60plus None
MLOCMLOC_15055.216542e-24612 - 67110060 / 60plus None
MLOCMLOC_15055.416322e-24611 - 67010060 / 60plus None
JLOC1JLOC1_10308.317218e-25563 - 62210060 / 60plus
JLOC1JLOC1_10308.118128e-25650 - 70910060 / 60plus
Harvest21ABC481146453e-25563 - 62210060 / 60plus
Harvest35U35_208327503e-25668 - 72710060 / 60plus



Contig Sequence (750 bp)

>U35_20832 750 Hv_44K_v2
ATCTAGCCTACAAGATCCACGGGATCTATCACGGAGAGGTTCCGAAGAGGGCCTAAACCC
TCACAAACCCTTCCATTCGAGTAATGGCTGGCGGCGGCGCGGTGCCCCCGCCACCGCGGC
AGCTGGAAGTTCGACGCTTCTCGTCTGACCGCGTCGGAGAACTACGGTCCCTGCACGGCG
CCGTCTCAGCTCTCGTCAGCGGCCGCTTCCAGCAGCCCCGCACCGCACGCCGCCGCACCA
CGGGGCACCTCCCCTCCAAGCGCCGTCGCACAAGCAGAGGTGCCGCGGCGGGCCAGGCTC
CCGAGGAGGGTAACCCCTCGGCGCGTCAGTCAAGGAGGGTGAGGCGCCGGCGAGAGCTTG
CTGGCAACCCCGCAGAGGGGTTCTCAGTCGCCGGTGATGGCGCGCGGCGGCTGCGCACCC
ACCTGTGGCATGCAAAGAGGTTCGCCATGGCAAGGCGGTGGGGTTTCGTCTTGCCCATTG
GCTCCCACGGGAGCGGGAGGGGTTCAAGGGCAGTTCTCAAGTGGTTGAAAAATGGAACAA
TTGTTCATGATGCTAGCTACTTCATTCCGATTCAACTAAACGGTCCAGAGGATTCCCTAT
TAACCATTCTGGGAATGGTTATTTGTCCATCTCCCGCAGATAAAGCACCTGATTTAAAGC
ACCTACAAGATAAAGTTATGCAAGGTGTTTGCATTGAAAACGCTATGCTTTGGCGTGCTG
GGTGTCCCCACTCTCATGTTGTTGGGCCAG



Homology of Contig U35_20832 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os11g45250.18576e-93protein|ribonucleases P/MRP protein subunit POP1 containing protein, expressed
Brachypodium v1_2Bradi4g09997.18492e-107
Arabidopsis v10None