- Probe CUST_10655_PI390587928
- Source Contig U35_44802
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_10655_PI390587928 | Hv_44K_v2 | CTTGCCCCTTTGAATGGTGGGAAACGAATTTGGGTTATTATTACATAGGTAAAGTATTTA | 36 | GeneList: darkturquoise MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.196 | 0.399 | 1.699 | 2.077 | 1.099 | 1.101 |
| Raw | 17.101 | 57.428 | 210.038 | 386.350 | 74.485 | 80.853 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC42959 | 181 | 3e-25 | 37 - 96 | 100 | 60 / 60 | minus | ABC42959 |
| Harvest35 | U35_44802 | 181 | 3e-25 | 37 - 96 | 100 | 60 / 60 | minus |
Contig Sequence (181 bp)
>U35_44802 181 Hv_44K_v2 TTTTTTTTTTTTTTTTTGGTCAACCAACACAATATTTAAATACTTTACCTATGTAATAAT AACCCAAATTCGTTTCCCACCATTCAAAGGGGCAAGGGTGTTGTGGCTACATTTTCCACA AAAAAAACCGGACCGTGGATTTGGCAAGCCACCTGGGTTTCAAGAATCTCTTTGGGTTGA T
Homology of Contig U35_44802 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |