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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10650_PI390587928Hv_44K_v2GGGGTTTTGTAATCCGATTTGGTGGTATGTTTTTAAATTTTCGTTGTAACCGGTGTTAAA14GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_1954.18833e-21512 - 5719758 / 60plus ABC05630 ABC42970
JLOC1JLOC1_1187.18122e-21523 - 5829758 / 60plus
Harvest21ABC429703063e-2515 - 7410060 / 60minusABC42970
Harvest21ABC056306006e-22383 - 4429758 / 60plusABC05630
Harvest35U35_448093063e-2515 - 7410060 / 60minus
Harvest35U35_166246236e-22406 - 4659758 / 60plus



Contig Sequence (306 bp)

>U35_44809 306 Hv_44K_v2
TTTTTTTTTTTTTTTTTAACACCGGTTACAACGAAAATTTAAAAACATACCACCAAATCG
GATTACAAAACCCCACAACCATTACCCGATAGCTTTGCAAACGGACAGATCTTGAACTAA
ATCCAGCGGAGGAGCTCGGACCGATCGATGCTGGCGGGGGGCCCCCTCGGCTAGCCGGGG
TAAACGTGGACCCCGACGGCGATGATAAAAATGGTGACCACCCCCAAATAAAGGACGGCG
TGGATAAAGATGGAAAGGCCCCTGGTGTGCATGCTACCAAACTCTGCCACCCGCCCGCCC
CCCGGG



Homology of Contig U35_44809 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None