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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10590_PI390587928Hv_44K_v2TTAAATGCTCTTTAATTAATGCACATATATAATTGGAAGAGGCAGAAGGCCTCGCCTTTT781GeneList: red
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.4621.6981.5510.7970.2460.242
Raw 215.955395.782309.979254.31526.78429.917



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC164078693e-25782 - 84110060 / 60plusABC16407
Harvest35U35_216438693e-25782 - 84110060 / 60plus



Contig Sequence (869 bp)

>U35_21643 869 Hv_44K_v2
TCCTCTCCCCCTATCGCCGTCGGGGTGAGCTCCCGAGCATCGCCGTCACCATGGACAGCT
CCTGCTCCAGCTCCAGCTCATCGCCGGTGTAGCGTCGCCCCTCTTCTTCCCCCACTGCAC
GAGGAGCATGCAGACGCTAAGGGAGATCCATTCCCGAAGAGATCGGACGCCAAGGTCTTC
TACCACAATGTCGCCGACGTCCACTACTTCGGCCTCCTCCGGCGAGCGTCTTCTACAGGA
GAGCGTCGCCGCTGTTCCTCGCCATCCCCAGAACCCCTCTTCTCCGCCCCTGGGAATTCT
GGAGCGTGGCGTGCGTGGAGCCACAGCCGTGCGATGGCTGGGTCGCACGGATGGGCGCAC
GCAGCAGCCGCAGGCAAGGCGCGTCCCCCTGTTAGTGCAGCTACATTAGTGTAGCCCAAT
GGTGGGGGCACTATGGTTAGAGCAGGAGCATCGGGTGGTGAGAACAAGTTCGAGGATTCT
GTTGAGTATGTTCAGGAAGATCAAGAGCAGTTTCAGTTTGAAGATTTCACGTGCAAGATG
ATCATGACTTTGACACCGTTTCCAGCTTTATTATGCCTAGTTGAACCGCTTCCATAGTTA
CTTATCGCTGCGTACCACCTGACAAATAAGCCTCCAAACATTTCCATGAAACCTCTAACC
CATCACCTCCTAGCAAATATTATTTAGCTAAGTTAGTGCTTGCTCAACCATGTTGTAGAA
TTGCTAGTTGCAGGTGCAAGCTGGTCCATGTGATAACATGGGCAATTATTATCATCTTAC
TTTAAATGCTCTTTAATTAATGCACATATATAATTGGAAGAGGCAGAAGGCCTCGCCTTT
TGCTAAAAACAAAAAAAAAAAAAAAAAAA



Homology of Contig U35_21643 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None