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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10526_PI390587928Hv_44K_v2TATGTCTGCAATAATGCATGGCTAAGTGAACCTCCACTCCTTTTGATTAATGTCAAAAAA909GeneList: salmon
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 19.1057.1611.1800.7650.3910.495
Raw 477.676280.23142.19345.1426.66210.206



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_152659793e-25910 - 96910060 / 60plus



Contig Sequence (979 bp)

>U35_15265 979 Hv_44K_v2
ATACACTGCGCCTGCGCCTGCGCCACACACACCCCTCGACACCAAAGGTTCCCGGATCCT
GTTCCATGGGGCTTCTGGACCAGCTGTGGGACGACACGGTGGCCGGGCCGCGGCCGGACC
ACGGCCTCGGCAGGCTCCGCAAGTACGCCTCCTTCTCCCCGTCCTCCGCGGCGGCCGGCA
CGACCGCCGCGCCGTCGGCCGACCTTGCGGCGCCGGCCGTGACGCGGAGCATCACCATCC
TCCGCCCGCCGGCCCTGTCCGTGACGTCCCCGCGCAGCGAGTCCGGCTCCGGCTCCGCGC
CCTCGTCCCCGGCCAGCGTCCCCGACTCCCCCTTCGGCACAGCAACGACACCCAGGGGAG
AGGGCTGGAGCAAGCTGCGCCGCAAAGGCAGGATGGCCGCCGACGGGGCGGACGCCAGCC
CCGGCACCCCCAGGAGCCCCACCGTCTACGACTGGGTGGTGATCAGTTCGCTGGACCGCT
AACCGTGAAAAAAGAAGAAGCAGATCCACAAGACGGAGGAGAACTGCAGGAGCACAACGA
GAGTAGCCGCAAACTACGTATGACCGGAAGATGGAACCCTGTCCCAGTAGTATATGCTAT
CAGTTATGTACTACTACTTCCGTTGTAAACTAAACATCATCCACTCCACGTGAGCTGGTG
CTAGTTTTCGTAGCCAAGGATGTGTGCCACCGCGTAGATAGCTGAAGGAGAAGAGTTCGT
AGTAGGCAACCGGCGACGTGCAACCACCTGAGGCGAATGAGACCGAGATGTGAAGCGTGT
GTAAATCCTACCAGTGGTAGATGTAGATGAAGAGGGGATGCTGAGCTCTGGCCGTCAGGC
TCTCCCCCTGCTGTTCTGTAGTCTGTACAAGGCCCGCGGGCAGCATGTGCTGATGCATGC
AGTGTAAAATATGTCTGCAATAATGCATGGCTAAGTGAACCTCCACTCCTTTTGATTAAT
GTCAAAAAAAAAAAAAAAA



Homology of Contig U35_15265 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None