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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10423_PI390587928Hv_44K_v2TCGACTCCGGCAGCCTCCAGGTGCGCGACGTCGACGCCACCGTTCTCTGGGACAGCTTCT567GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36892929183e-21580 - 6399758 / 60plus ABC18728
MLOCAK36206628333e-21427 - 4869758 / 60plus ABC18728
MLOCMLOC_37032.115983e-21121 - 1809758 / 60plus None
MLOCMLOC_37032.215953e-21121 - 1809758 / 60plus None
JLOC1JLOC1_23924.216072e-21112 - 1719758 / 60plus
JLOC1JLOC1_23924.116362e-21144 - 2039758 / 60plus
Harvest21ABC218066261e-24568 - 62610059 / 59plus
Harvest35U35_277336273e-25568 - 62710060 / 60plus



Contig Sequence (627 bp)

>U35_27733 627 Hv_44K_v2
CGCCATAACGCACTCCCTCCCTCCTTCCCTCTCTCTCTCTCTCTTTCTCTGTCTGCTCGC
CACCAGTGAGGTGGTAGTTGGTGGCTGGCTGGGCGCTACCTCAGCAGGCAAAAGCGGGTA
GAGGGGCAGCGGGAGCCAGGAGGAGGGAGGGAGGGCCTGCTGCGTCCATGGCGATGGCGG
CTTCTCGCCTCCTCATCTGGCTCTGCGGCGCGCTGGCCGTGGCGGCGGCGGCCACGGACA
CGCTGAAGCAGGGGGACTCGCTGACGGCGCCGGCGACGCTGGTGTCCTCGCCGTTGGGGG
TGTTCGAGCTGGGCTTCCACGCGCCGGACCCCGCGCGCCCGGCCCGCCTCTACCTCTGCG
TCTGGTACCGCGACACTCGGCCCAGGACCGTCGCGTGGGTCGCCAACCGCGCCAACGCGG
CCGCCGCGGCCGCGCCCTCGCTCACGCTCACGGCCGGCGGCGAGCTCCGCGTCCTCGACG
GCGCCGCCAAGGACGGCGCGCCCATGCTCTGGTCCTCCAACACCACCACGCGGGCCGCGC
CGCGCGGGGGCTACGAGGCCGTCATCCTCGACTCCGGCAGCCTCCAGGTGCGCGACGTCG
ACGCCACCGTTCTCTGGGACAGCTTCT



Homology of Contig U35_27733 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g25180.18481e-57
Arabidopsis v10None