- Probe CUST_1034_PI390587928
- Source Contig U35_40177
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_1034_PI390587928 | Hv_44K_v2 | AACAACACTTGCCCGTTGAATTTATTTTTTGGAATCGAACGGCAGGTGTTTTGCCTTTTC | 21 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | MLOC_58592.9 | 2123 | 3e-21 | 1935 - 1994 | 97 | 58 / 60 | plus | None |
Harvest35 | U35_40177 | 290 | 3e-25 | 22 - 81 | 100 | 60 / 60 | minus |
Contig Sequence (290 bp)
>U35_40177 290 Hv_44K_v2 TTTTTTTTTTTTTTTTTAAAAGAAAAGGCAAAACACCTGCCGTTCGATTCCAAAAAATAA ATTCAACGGGCAAGTGTTGTTGGGTTACAGCGAACATGTCTACTTAGCTTCCTGCAAACA CCAAATCAATCGTGGGGGCAATGCAAATTTTGCACCCTTGCCACACATGAAATTCATCGG TTCTTTTAACACAATCTGGAGCTCTTCCTTCCTTGGACATCATCAAAGGAAACAATGCCC GGTTCTTTATTGCGTGGTACGAGGCCCCGGTTTCCATATCTACATGAGGT
Homology of Contig U35_40177 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |