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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10335_PI390587928Hv_44K_v2AGCCGAGGGACGATATAATTCAACATTGTCAAATTCGATGTTGAGTTATCTAAGTGACAT609GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36935046982e-243483 - 354210060 / 60plus ABC24810
Harvest21ABC273416723e-25610 - 66910060 / 60plus
Harvest35U35_284636723e-25610 - 66910060 / 60plus



Contig Sequence (672 bp)

>U35_28463 672 Hv_44K_v2
GGCCCATATAGGNGGAGAAGTATGACAATATACTAGCCGGAATTGAGCACCTTTTCACTC
TCCAGTACATTGCTGCACAAATTGGAGCTACTACTGACTCAGACTGGTGGGCTGCAAGGT
CAGCGATCAATGATGCCATTGACAAGCACCCAAGGTGTCCTAGAAGTAGCTTCCAGTGGG
TGGATCCGATTGAGGAAGAATGTCGTCCTTCAGAGAAACATTATTGGAGCCAAGAAAAGG
TTTTGACATCAACGTGCTTCTCAGAGAAGCAAGGAGCCGATGGTTAAAGCCTTCTGAAGT
TTACTATATCTTGTTGAATCATGAACAGCTCCAGATCACCCATGAGCCACCAAATAGGCC
ACCCAGTGGTTCACTATTCCTTTATAATAGCCGTGTGAATCGGTTTTTCCGGAAAGATGG
TCATGCATGGCGAAGGAAAAGAGACGGAAGAACTGTTCGGGAGGCTCACGAGCGATTAAA
GGTTGGAAATGTTCATACTTTGAGTTGCTACTATGCTCATGGAGAGCAAAATCTATGTTT
TCAGAGACGATGTTTCAGGATGCTGGAACCTGCATATGACCATATTGTGCTGGTACAATA
TAGAGAAGTAGCCGAGGGACGATATAATTCAACATTGTCAAATTCGATGTTGAGTTATCT
AAGTGACATTCA



Homology of Contig U35_28463 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g31900.110043e-70protein|calmodulin-binding transcription activator 4, putative, expressed
Brachypodium v1_2Bradi5g08167.28883e-76
Arabidopsis v10None