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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10260_PI390587928Hv_44K_v2CTGCAAAAAAGACAGATAAAAACAAAATATGTGTTTTCCGCATGGCACAATTTTGCCTCT676GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_61471.1023962e-241497 - 155610060 / 60plus ABC24303
MLOCMLOC_61471.726682e-241763 - 182210060 / 60plus ABC24303
MLOCMLOC_61471.923762e-241596 - 165510060 / 60plus ABC24303
JLOC1JLOC1_40171.927418e-251798 - 185710060 / 60plus
JLOC1JLOC1_40171.429368e-251993 - 205210060 / 60plus
JLOC1JLOC1_40171.227858e-251894 - 195310060 / 60plus
JLOC1JLOC1_40171.124718e-251528 - 158710060 / 60plus
Harvest21ABC273947593e-25677 - 73610060 / 60plus
Harvest35U35_284947593e-25677 - 73610060 / 60plus



Contig Sequence (759 bp)

>U35_28494 759 Hv_44K_v2
GAAGTCTGGAAAAACTGAAAAAGAGGCACATCAAGCATTGAAGGTCATCTAAATTATCTA
GGGCTATACTTGTCTTTTGTAGCATTGTTTCAGGTCAACTATAATGATGAACCAGCTGTG
TTTCGGAAAGGATCTAGTGTTTATCGAGATAAGGTCAAAACAGAAGACTATGGGAATCCC
ATAAAAAGAACCCGTGAGGCAATCACAGTATCAAATTTTGATCTCATAGGTCCTGAGTTC
TGGGAAACCCATCAATACATTCTTGGAGAAGCATCAGACTACCTGTGTGTTGGGGGGAAA
GAAAAATATGGATATGAGTATGTGAAGAAGTTCGACAACATCCATAAGCTTCCATGTTCT
AATTGGACCATTGTTCGTATTAGCGCCTGCCAATTTGATCAGTGAGGACTTCTAGTTTCC
TATTTATTTAAACACACACGGCAATACCATTTAGATAATTATATCTTCTTATCAACATGG
AGAATTATTTTTTCCCCCAGATTCTCACTGATCCATTCATTTGACAAGCCAAATGATGAG
ACTGCTTTAAGGCTGATGAACGCTTGTGCTTCACTGATGATGGAGCAATTTCCTGATATT
ATCTTTGGCTATGGTTTTGACAATGAGTACAGGTATGATCTACGTCTTGAGAATAGCTGT
GTTTGCATGGAGAAGACTGCAAAAAAGACAGATAAAAACAAAATATGTGTTTTCCGCATG
GCACAATTTTGCCTCTTTTCATCAATAATAGTAATTTGA



Homology of Contig U35_28494 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi2g18677.15154e-58
Arabidopsis v10None