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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10202_PI390587928Hv_44K_v2GCGGCCATCGCCGCTCTGTAACTGTTTTTTCTAATCTTAATAAAGATCGGCTTTGCGTTT3GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.9981.8651.2910.7930.5210.464
Raw 26.93936.40024.07723.1803.0163.280



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_330257653e-254 - 6310060 / 60minus



Contig Sequence (765 bp)

>U35_33025 765 Hv_44K_v2
TCGAAACGCAAAGCCGATCTTTATTAAGATTAGAAAAAACAGTTACAGAGCGGCGATGGC
CGCCAGGTGTATAAACAGGGCAAGTGCCACAACGAAGCCTCGAGGCCAAGTGCCTGAAAC
CCAGGACACCATAAAACAGAGAACCCCTACCGGCAAGGCAAGCAAGCCATGACCCAGACC
TGCTGCTGCAGCACAAGCACAACGCAAGCACGCCATCTAAAAGGCTATGGTGGTAGCGAA
GCAGCCTGCCTCACACCAGGATCGCAGATCCTCAATGATCGCTGCGATCCTCAATGATCG
CTTCGACCACTTCTAATCCATATTCATATGGTACACGCCGAATATGTGACAACACATGGC
CAATTTATATCAGCGGCCGCTACGGGGCCGTAACATTTAAAAGCACAAGTTTGGTAAATA
ATCTGGGCACCCGTTCGGCAACGCCTCAGCAAATGTTATTTACTCCTAAACACATTGCTT
TGAAACAATATACTACATAACGCTCAAGCTCACCTTACAGGTGACCCACCAGGATGAATG
CAACCATGCCACCATGGGACTCACTTTTATTTTAATTAGGAGCTTAAGCCCTTAGATCGC
CATGGGACTCACTTAGTTCTGCAGCATCGACACCGCCTCCTTGTCGGTGAACCAGGTGAA
TTCTCCATCGTCAAGCACAGCCATCTCAACGGGAGCGGCCGCTCAACCGTTTTCAACTTG
CTATACTGCACGAGTTCGGATGCATTCAATTCAAACAGAGTACTA



Homology of Contig U35_33025 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None