- Probe CUST_10159_PI390587928
- Source Contig U35_45024
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_10159_PI390587928 | Hv_44K_v2 | GAGCAGCAATCTTCAAGGACCTGCAGCCACAAGCCATGCAAAACCTGCTTCTCCCCAATG | 19 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | AK372753 | 1736 | 2e-24 | 28 - 87 | 100 | 60 / 60 | plus | ABC18583 ABC49401 |
Harvest21 | ABC43388 | 276 | 3e-25 | 20 - 79 | 100 | 60 / 60 | plus | |
Harvest35 | U35_45024 | 276 | 3e-25 | 20 - 79 | 100 | 60 / 60 | plus |
Contig Sequence (276 bp)
>U35_45024 276 Hv_44K_v2 GTTGCTCCCAAATAAGGGCGAGCAGCAATCTTCAAGGACCTGCAGCCACAAGCCATGCAA AACCTGCTTCTCCCCAATGCTGCCGCCGCGCCCTGGTGCGCGCAACCGCGGCGGCGGCCA TCCCGCCTCCCCGTGCGCGCCTCGGCGTCGTCACCGTCGGCGCCTCGGCGGGAGACCGAC CCGAGGAAGCGGGTGGTGATCACGGGGATGGGCGTGGTGTCGGTGTTCGGGAACGACGTG GACGCCTACTACGCCCGGCTCCTCGCCGGGGAGAGC
Homology of Contig U35_45024 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |